Evidence map›Paper›PMID 20489209›Full record

ArticleThe Journal of biological chemistry2010

Maturation mechanism of severe acute respiratory syndrome (SARS) coronavirus 3C-like proteinase.

Chunmei Li, Yifei Qi, Xin Teng, Zongchang Yang, Ping Wei, Changsheng Zhang, Lei Tan, Lu Zhou, Ying Liu, Luhua Lai

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 72 citations in OpenAlex.

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  16. A genetically encoded BRET-based SARS-CoV-2 MCommunications chemistry · 2022
    Article
  17. Maturation of the SARS-CoV-2 virus is regulated by dimerization of its main protease.Computational and structural biotechnology journal · 2022
    Article
  18. Journal of enzyme inhibition and medicinal chemistry · 2021
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Chunmei LiBeijing National Laboratory for Molecular Science, College of Chemistry and Molecular Engineering, Peking University, Beijing 100871, China.
Yifei Qi
Xin Teng
Zongchang Yang
Ping Wei
Changsheng Zhang
Lei Tan
Lu Zhou
Ying Liu
Luhua Lai
Peking University · CNBeijing National Laboratory for Molecular Sciences · CNState Key Laboratory for Structural Chemistry of Unstable and Stable Species

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 3C-like proteinase (3CL(pro)) of the severe acute respiratory syndrome (SARS) coronavirus plays a vital role in virus maturation and is proposed to be a key target for drug design against SARS. Various in vitro studies revealed that only the dimer of the matured 3CL(pro) is active. However, as the internally encoded 3CL(pro) gets matured from the replicase polyprotein by autolytic cleavage at both the N-terminal and the C-terminal flanking sites, it is unclear whether the polyprotein also needs to dimerize first for its autocleavage reaction. We constructed a large protein containing the cyan fluorescent protein (C), the N-terminal flanking substrate peptide of SARS 3CL(pro) (XX), SARS 3CL(pro) (3CLP), and the yellow fluorescent protein (Y) to study the autoprocessing of 3CL(pro) using fluorescence resonance energy transfer. In contrast to the matured 3CL(pro), the polyprotein, as well as the one-step digested product, 3CLP-Y-His, were shown to be monomeric in gel filtration and analytic ultracentrifuge analysis. However, dimers can still be induced and detected when incubating these large proteins with a substrate analog compound in both chemical cross-linking experiments and analytic ultracentrifuge analysis. We also measured enzyme activity under different enzyme concentrations and found a clear tendency of substrate-induced dimer formation. Based on these discoveries, we conclude that substrate-induced dimerization is essential for the activity of SARS-3CL(pro) in the polyprotein, and a modified model for the 3CL(pro) maturation process was proposed. As many viral proteases undergo a similar maturation process, this model might be generally applicable.

Indexed as

Amino Acid SequenceCoronavirus 3C ProteasesCysteine EndopeptidasesGreen Fluorescent ProteinsIsatinPeptidesPolyproteinsProtease InhibitorsProtein MultimerizationProtein Structure, QuaternarySevere acute respiratory syndrome-related coronavirusUltracentrifugationViral ProteinsCoronavirus 3C ProteasesCyan Fluorescent ProteinCysteine EndopeptidasesGreen Fluorescent ProteinsIsatinPeptidesPolyproteinsProtease InhibitorsViral Proteins

Identifiers

PMID20489209
PMCPMC2934678
OpenAlexW2149927556

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.