Evidence map›Paper›PMID 20489179›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Strong synaptic transmission impact by copy number variations in schizophrenia.

Joseph T Glessner, Muredach P Reilly, Cecilia E Kim, Nagahide Takahashi, Anthony Albano, Cuiping Hou, Jonathan P Bradfield, Haitao Zhang, Patrick M A Sleiman, James H Flory and 18 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 129 papers, 7 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
129citing papers in PubMed, 7 pooled it
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

129 citing papers in PubMed, 7 syntheses or guidelines pooled it, 239 citations in OpenAlex.

  1. Pooled it
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  6. 1q21.1 Microduplication expression in adults.Genetics in medicine : official journal of the American College of Medical Genetics · 2013
    Pooled it
  7. Distribution of disease-associated copy number variants across distinct disorders of cognitive development.Journal of the American Academy of Child and Adolescent Psychiatry · 2013
    Pooled it
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69 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 6 institutions in 3 countries.

Joseph T GlessnerCenter for Applied Genomics, The Children's Hospital of Philadelphia, Philadelphia, PA 19104, USA.
Muredach P Reilly
Cecilia E Kim
Nagahide Takahashi
Anthony Albano
Cuiping Hou
Jonathan P Bradfield
Haitao Zhang
Patrick M A Sleiman
James H Flory
Marcin Imielinski
Edward C Frackelton
Rosetta Chiavacci
Kelly A Thomas
Maria Garris
Frederick G Otieno
Michael Davidson
Mark Weiser
Abraham Reichenberg
Kenneth L Davis
Joseph I Friedman
Thomas P Cappola
Kenneth B Margulies
Daniel J Rader
Struan F A Grant
Joseph D Buxbaum
Raquel E Gur
Hakon Hakonarson
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · USIcahn School of Medicine at Mount Sinai · USSheba Medical Center · ILWilliam Penn University · USKing's College London · GB

Funding

Theta and Gamma Oscillations in Cortical MicrocircuitsP50MH064045 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RAQUEL E · 2001 to 2010
$21.6M
White Matter Abnormalities in SchizophreniaP50MH066392 · NIMH · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BUXBAUM, JOSEPH D. · 2002 to 2012
$18.6M
Genomics of myocardial transcription factors in cardiac remodelingR01HL088577 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CAPPOLA, THOMAS P. · 2007 to 2013
$5.3M
The Neurobiology of Affective Dysfunction in SchizophreniaR01MH060722 · NIMH · UNIVERSITY OF PENNSYLVANIA · PI GUR, RUBEN C. · 2001 to 2010
$4.8M
MECHANISMS OF IMPROVED DIASTOLIC FUNCTION IN HUMAN HEARTR01AG017022 · NIA · UNIVERSITY OF PENNSYLVANIA · PI MARGULIES, KENNETH BER · 1998 to 2007
$2.9M
Transcriptional modules in human heart failureR21HL092379 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI CAPPOLA, THOMAS P., HANNENHALLI, SRIDHAR · 2008 to 2009
$433k
NHLBI NIH HHS R01 HL088577NHLBI NIH HHS R01HL0885775NHLBI NIH HHS R21 HL092379NHLBI NIH HHS R21HL092379NIA NIH HHS R01 AG017022NIA NIH HHS R01AG17022NIMH NIH HHS MH066392NIMH NIH HHS P50 MH064045NIMH NIH HHS P50 MH066392NIMH NIH HHS R01 MH060722
6 · The paper itself

Abstract

Schizophrenia is a psychiatric disorder with onset in late adolescence and unclear etiology characterized by both positive and negative symptoms, as well as cognitive deficits. To identify copy number variations (CNVs) that increase the risk of schizophrenia, we performed a whole-genome CNV analysis on a cohort of 977 schizophrenia cases and 2,000 healthy adults of European ancestry who were genotyped with 1.7 million probes. Positive findings were evaluated in an independent cohort of 758 schizophrenia cases and 1,485 controls. The Gene Ontology synaptic transmission family of genes was notably enriched for CNVs in the cases (P = 1.5 x 10(-7)). Among these, CACNA1B and DOC2A, both calcium-signaling genes responsible for neuronal excitation, were deleted in 16 cases and duplicated in 10 cases, respectively. In addition, RET and RIT2, both ras-related genes important for neural crest development, were significantly affected by CNVs. RET deletion was exclusive to seven cases, and RIT2 deletions were overrepresented common variant CNVs in the schizophrenia cases. Our results suggest that novel variations involving the processes of synaptic transmission contribute to the genetic susceptibility of schizophrenia.

Indexed as

DNA Copy Number VariationsSynaptic TransmissionCohort StudiesGene DeletionGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansPolymorphism, Single NucleotideSchizophrenia

Identifiers

PMID20489179
PMCPMC2890845
OpenAlexW2130842427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.