Evidence map›Paper›PMID 20487270›Full record

ArticleMolecular microbiology2010

The alternative oxidase (AOX) gene in Vibrio fischeri is controlled by NsrR and upregulated in response to nitric oxide.

Anne K Dunn, Elizabeth A Karr, Yanling Wang, Aaron R Batton, Edward G Ruby, Eric V Stabb

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Complex Interplay of Heme-Copper Oxidases with Nitrite and Nitric Oxide.International journal of molecular sciences · 2022
    Review
  6. Review
  7. Review
  8. Article
  9. CytochromesApplied and environmental microbiology · 2018
    Article
  10. Article
  11. Article
  12. Article
  13. Impact and Influence of the NaturalFrontiers in microbiology · 2016
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Anne K DunnDepartment of Botany and Microbiology, University of Oklahoma, Norman, OK 73019, USA. akdunn@ou.edu
Elizabeth A Karr
Yanling Wang
Aaron R Batton
Edward G Ruby
Eric V Stabb
University of Oklahoma · USUniversity of Wisconsin–Madison · USUniversity of Georgia · US

Funding

VIBRIO VIRULENCE DETERMINANTS IN A BENIGN COLONIZATIONR01RR012294 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI RUBY, EDWARD G · 1996 to 2011
$6.4M
Vibrio Virulence Determinants in a Benign ColonizationR01OD011024 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2012 to 2020
$3.9M
NCRR NIH HHS R01 RR012294NCRR NIH HHS RR2294NIH HHS R01 OD011024
6 · The paper itself

Abstract

Alternative oxidase (AOX) is a respiratory oxidase found in certain eukaryotes and bacteria; however, its role in bacterial physiology is unclear. Exploiting the genetic tractability of the bacterium Vibrio fischeri, we explore the regulation of aox expression and AOX function. Using quantitative PCR and reporter assays, we demonstrate that aox expression is induced in the presence of nitric oxide (NO), and that the NO-responsive regulatory protein NsrR mediates the response. We have identified key amino acid residues important for NsrR function and experimentally confirmed a bioinformatically predicted NsrR binding site upstream of aox. Microrespirometry demonstrated that oxygen consumption by V. fischeri CydAB quinol oxidase is inhibited by NO treatment, whereas oxygen consumption by AOX is less sensitive to NO. NADH oxidation assays using inverted membrane vesicles confirmed that NO directly inhibits CydAB, and that AOX is resistant to NO inhibition. These results indicate a role for V. fischeri AOX in aerobic respiration during NO stress.

Indexed as

Gene Expression Regulation, BacterialGene Expression Regulation, EnzymologicAliivibrio fischeriAlternative OxidaseBacterial ProteinsBase SequenceBinding SitesDNA, BacterialGene Expression ProfilingGenes, ReporterMitochondrial ProteinsMolecular Sequence DataNitric OxideOxidoreductasesOxygen ConsumptionPlant ProteinsAlternative OxidaseBacterial ProteinsDNA, Bacterialduroquinol oxidaseMitochondrial ProteinsNitric OxideOxidoreductasesPlant ProteinsTranscription Factors

Identifiers

PMID20487270
PMCPMC3682826
OpenAlexW2114553415

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.