Evidence map›Paper›PMID 20484246›Full record

ArticleMolecular human reproduction2010

SNP microarray-based 24 chromosome aneuploidy screening is significantly more consistent than FISH.

Nathan R Treff, Brynn Levy, Jing Su, Lesley E Northrop, Xin Tao, Richard T Scott

Abstract readComparative Study
In one paragraph

Article in Molecular human reproduction, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Genomic aspects in reproductive medicine.Clinical and experimental reproductive medicine · 2024
    Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Genetic Counseling and Assisted Reproductive Technologies.Cold Spring Harbor perspectives in medicine · 2020
    Review
  9. Observational
  10. Review
  11. Article
  12. Review
  13. Review
  14. Early human embryos are naturally aneuploid-can that be corrected?Journal of assisted reproduction and genetics · 2017
    Review
  15. Article
  16. Review
  17. Prenatal and pre-implantation genetic diagnosis.Nature reviews. Genetics · 2016
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nathan R TreffReproductive Medicine Associates of New Jersey, Morristown, NJ 07960, USA. ntreff@rmanj.com
Brynn Levy
Jing Su
Lesley E Northrop
Xin Tao
Richard T Scott

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many studies estimate that chromosomal mosaicism within the cleavage-stage human embryo is high. However, comparison of two unique methods of aneuploidy screening of blastomeres within the same embryo has not been conducted and may indicate whether mosaicism has been overestimated due to technical inconsistency rather than the biological phenomena. The present study investigates the prevalence of chromosomal abnormality and mosaicism found with two different single cell aneuploidy screening techniques. Thirteen arrested cleavage-stage embryos were studied. Each was biopsied into individual cells (n = 160). The cells from each embryo were randomized into two groups. Those destined for FISH-based aneuploidy screening (n = 75) were fixed, one cell per slide. Cells for SNP microarray-based aneuploidy screening (n = 85) were put into individual tubes. Microarray was significantly more reliable (96%) than FISH (83%) for providing an interpretable result (P = 0.004). Markedly different results were obtained when comparing microarray and FISH results from individual embryos. Mosaicism was significantly less commonly observed by microarray (31%) than by FISH (100%) (P = 0.0005). Although FISH evaluated fewer chromosomes per cell and fewer cells per embryo, FISH still displayed significantly more unique genetic diagnoses per embryo (3.2 +/- 0.2) than microarray (1.3 +/- 0.2) (P < 0.0001). This is the first prospective, randomized, blinded and paired comparison between microarray and FISH-based aneuploidy screening. SNP microarray-based 24 chromosome aneuploidy screening provides more complete and consistent results than FISH. These results also suggest that FISH technology may overestimate the contribution of mitotic error to the origin of aneuploidy at the cleavage stage of human embryogenesis.

Indexed as

AneuploidyPolymorphism, Single NucleotideReproductive Techniques, AssistedFemaleHumansIn Situ Hybridization, FluorescenceMicroarray AnalysisPregnancyPreimplantation Diagnosis

Identifiers

PMID20484246
PMCPMC2907219

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.