Evidence map›Paper›PMID 20484050›Full record

ArticleThe Journal of biological chemistry2010

Inhibition of thrombin formation by active site mutated (S360A) activated protein C.

Gerry A F Nicolaes, Paul E Bock, Kenneth Segers, Karin C A A Wildhagen, Björn Dahlbäck, Jan Rosing

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Gerry A F NicolaesDepartment of Biochemistry, Cardiovascular Research Institute Maastricht, Maastricht University, 6200MD Maastricht, The Netherlands. G.Nicolaes@bioch.unimaas.nl
Paul E Bock
Kenneth Segers
Karin C A A Wildhagen
Björn Dahlbäck
Jan Rosing
Maastricht University · NLLund University · SEVanderbilt University · US

Funding

FACTOR VA INTERACTIONS REGULATING PROTHROMBIN ACTIVATIONR01HL038779 · NHLBI · VANDERBILT UNIVERSITY · PI BOCK, PAUL E · 1994 to 2010
$3.0M
NHLBI NIH HHS R01 HL038779
6 · The paper itself

Abstract

Activated protein C (APC) down-regulates thrombin formation through proteolytic inactivation of factor Va (FVa) by cleavage at Arg(506) and Arg(306) and of factor VIIIa (FVIIIa) by cleavage at Arg(336) and Arg(562). To study substrate recognition by APC, active site-mutated APC (APC(S360A)) was used, which lacks proteolytic activity but exhibits anticoagulant activity. Experiments in model systems and in plasma show that APC(S360A), and not its zymogen protein C(S360A), expresses anticoagulant activities by competing with activated coagulation factors X and IX for binding to FVa and FVIIIa, respectively. APC(S360A) bound to FVa with a K(D) of 0.11 +/- 0.05 nm and competed with active site-labeled Oregon Green activated coagulation factor X for binding to FVa. The binding of APC(S360A) to FVa was not affected by protein S but was inhibited by prothrombin. APC(S360A) binding to FVa was critically dependent upon the presence of Arg(506) and not Arg(306) and additionally required an active site accessible to substrates. Inhibition of FVIIIa activity by APC(S360A) was >100-fold less efficient than inhibition of FVa. Our results show that despite exosite interactions near the Arg(506) cleavage site, binding of APC(S360A) to FVa is almost completely dependent on Arg(506) interacting with APC(S360A) to form a nonproductive Michaelis complex. Because docking of APC to FVa and FVIIIa constitutes the first step in the inactivation of the cofactors, we hypothesize that the observed anticoagulant activity may be important for in vivo regulation of thrombin formation.

Indexed as

MutationArginineBinding, CompetitiveBlood CoagulationBlood Coagulation FactorsCatalytic DomainCell LineCysteine EndopeptidasesEnzyme ActivationHumansModels, MolecularNeoplasm ProteinsProtein CProtein SProtein StabilityRecombinant ProteinsArginineBlood Coagulation Factorscancer procoagulantCysteine EndopeptidasesNeoplasm ProteinsProtein CProtein SRecombinant ProteinsThrombin

Identifiers

PMID20484050
PMCPMC2906281
OpenAlexW2046089822

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.