Evidence map›Paper›PMID 20483784›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2010

Vgamma2Vdelta2 T Cell Receptor recognition of prenyl pyrophosphates is dependent on all CDRs.

Hong Wang, Zhimei Fang, Craig T Morita

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. The emerging roles of γδ T cells in cancer immunotherapy.Nature reviews. Clinical oncology · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Observational
  13. Article
  14. Article
  15. Review
  16. γ9δ2T cell diversity and the receptor interface with tumor cells.The Journal of clinical investigation · 2020
    Article
  17. Microbial exposure drives polyclonal expansion of innate γδ T cells immediately after birth.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Review
  19. Article
  20. Review

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Hong WangDivision of Rheumatology, Department of Internal Medicine, Interdisciplinary Graduate Program in Immunology, University of Iowa College of Medicine, Iowa City, IA 52242, USA.
Zhimei Fang
Craig T Morita
University of Iowa · US

Funding

Virology and Smallpox VaccinationsU54AI057160 · NIAID · WASHINGTON UNIVERSITY · PI RAY, RANJIT · 2003 to 2013
$80.9M
ANTIGEN RECOGNITION BY GAMMA DELTA T CELLSR01AR045504 · NIAMS · UNIVERSITY OF IOWA · PI MORITA, CRAIG T · 1998 to 2007
$3.0M
Immunotherapy with Gamma Delta T Cells for B Cell TumorsR01CA113874 · NCI · UNIVERSITY OF IOWA · PI MORITA, CRAIG T · 2005 to 2008
$903k
PATHWAY FOR AUTOIMMUNE RECOGNITION BY GAMMA DELTA CELLSR03AR045095 · NIAMS · UNIVERSITY OF IOWA · PI MORITA, CRAIG T · 1997 to 1999
–
NCI NIH HHS CA113874NCI NIH HHS R01 CA113874NIAID NIH HHS AI057160NIAID NIH HHS U54 AI057160NIAMS NIH HHS AR45504NIAMS NIH HHS R01 AR045504NIAMS NIH HHS R03 AR045095
6 · The paper itself

Abstract

gammadelta T cells differ from alphabeta T cells in the Ags they recognize and their functions in immunity. Although most alphabeta TCRs recognize peptides presented by MHC class I or II, human gammadelta T cells expressing Vgamma2Vdelta2 TCRs recognize nonpeptide prenyl pyrophosphates. To define the molecular basis for this recognition, the effect of mutations in the TCR CDR was assessed. Mutations in all CDR loops altered recognition and cover a large footprint. Unlike murine gammadelta TCR recognition of the MHC class Ib T22 protein, there was no CDR3delta motif required for recognition because only one residue is required. Instead, the length and sequence of CDR3gamma was key. Although a prenyl pyrophosphate-binding site was defined by Lys109 in Jgamma1.2 and Arg51 in CDR2delta, the area outlined by critical mutations is much larger. These results show that prenyl pyrophosphate recognition is primarily by germline-encoded regions of the gammadelta TCR, allowing a high proportion of Vgamma2Vdelta2 TCRs to respond. This underscores its parallels to innate immune receptors. Our results also provide strong evidence for the existence of an Ag-presenting molecule for prenyl pyrophosphates.

Indexed as

Amino Acid SequenceAntigen PresentationCell SeparationDiphosphatesFlow CytometryHumansJurkat CellsLymphocyte ActivationMolecular Sequence DataMutagenesis, Site-DirectedMutationProtein BindingProtein Structure, QuaternaryReceptors, Antigen, T-Cell, gamma-deltaT-Lymphocyte SubsetsTransfectionDiphosphatesReceptors, Antigen, T-Cell, gamma-delta

Identifiers

PMID20483784
PMCPMC3069129
OpenAlexW2150876158

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.