Evidence map›Paper›PMID 20483767›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2010

Small interfering RNA screen for phosphatases involved in IgE-mediated mast cell degranulation.

Juan Zhang, Mary Mendoza, Michel F Guiraldelli, Emilia Alina Barbu, Reuben P Siraganian

Open access · bronzeAbstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. The transcription factor Zeb2 regulates signaling in mast cells.Journal of immunology (Baltimore, Md. : 1950) · 2012
    Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Juan ZhangReceptors and Signal Transduction Section, Oral Infection and Immunity Branch, National Institute of Dental and Craniofacial Research, National Institutes of Health, Department of Health and Human Services, Bethesda, MD 20892, USA.
Mary Mendoza
Michel F Guiraldelli
Emilia Alina Barbu
Reuben P Siraganian
National Institutes of Health · US

Funding

Signal Transduction In Mast CellsZ01DE000696 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI SIRAGANIAN, REUBEN P. · 1999 to 2008
$3.8M
Signal Transduction In Mast CellsZIADE000696 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI SIRAGANIAN, REUBEN P. · 2009 to 2011
$3.8M
Intramural NIH HHS Z01 DE000696Intramural NIH HHS Z99 DE999999Intramural NIH HHS ZIA DE000696
6 · The paper itself

Abstract

Mast cells play pivotal roles in the initiation of the allergic response. To gain an understanding of the functions played by phosphatases in IgE-mediated mast cell activation, a small interfering RNA (siRNA) library that targets all mouse phosphatase genes was screened in a mouse mast cell line, MMC-1. Of 198 targets, 10 enhanced and 7 inhibited FcepsilonRI-induced degranulation. For seven of the strongest hits, four different siRNAs per target were tested, and at least two out of the four single siRNA per target had similar effects as the pool suggesting that these were true hits. Bone marrow-derived mast cells from normal mice further validated these results for six definite positive targets. The mechanism of the reduced mast cell degranulation due to calcineurin B deficiency was investigated. Calcineurin B deficiency reduced the phosphorylation of MAPKs and the phosphorylation of protein kinase D/protein kinase Cmu and protein kinase Cdelta, which are involved in FcepsilonRI signaling. The screen, therefore, has identified several new molecules that are critical for FcepsilonRI-induced degranulation. Regulating the function of these proteins may be potential targets for the treatment of allergic inflammation. The result also indicates that the system used is efficient for searching molecules implicated in complex receptor-induced signaling.

Indexed as

Genetic TechniquesAnimalsCell DegranulationCell LineGene LibraryImmunoblottingImmunoglobulin EMast CellsMiceMice, Inbred C57BLPhosphoric Monoester HydrolasesReverse Transcriptase Polymerase Chain ReactionRNA, Small InterferingImmunoglobulin EPhosphoric Monoester HydrolasesRNA, Small Interfering

Identifiers

PMID20483767
PMCPMC2882511
OpenAlexW1533795806

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.