Evidence map›Paper›PMID 20479300›Full record

ArticleArchives of dermatology2010

Pyoderma gangrenosum-like ulcer in a patient with X-linked agammaglobulinemia: identification of Helicobacter bilis by mass spectrometry analysis.

Patrick R Murray, Ashish Jain, Gulbu Uzel, Raymond Ranken, Cristina Ivy, Lawrence B Blyn, David J Ecker, Rangarajan Sampath, Chyi-Chia Richard Lee, Maria L Turner

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in Archives of dermatology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Revisiting X-linked agammaglobulinemia.Journal of human immunity · 2025
    Review
  2. Review
  3. Pathogens (Basel, Switzerland) · 2022
    Article
  4. Infections With Enterohepatic Non-Frontiers in cellular and infection microbiology · 2021
    Review
  5. Article
  6. Pyoderma gangrenosum.Nature reviews. Disease primers · 2020
    Review
  7. Article
  8. Article
  9. Biographical Feature: Patrick R. Murray, Ph.D.Journal of clinical microbiology · 2016
    Article
  10. Review
  11. Article
  12. Article
  13. [Mass spectrometry in the clinical microbiology laboratory].Enfermedades infecciosas y microbiologia clinica · 2012
    Review
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Patrick R MurrayDepartment of Laboratory Medicine, Clinical Center, National Institutes of Health, Bethesda, MD, USA.
Ashish Jain
Gulbu Uzel
Raymond Ranken
Cristina Ivy
Lawrence B Blyn
David J Ecker
Rangarajan Sampath
Chyi-Chia Richard Lee
Maria L Turner
National Institutes of Health · USNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health Clinical Center · US

Funding

The Genetics, Pathogenesis, and Treatment of Primary ImmunodeficiencyZIAAI000924 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI JAIN, ASHISH · 2009 to 2013
$4.8M
The Genetics, Pathogenesis, and Treatment of Primary ImmunodeficiencyZ01AI000924 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI JAIN, ASHISH K · 2003 to 2008
$2.0M
Studies of Hyper- IgM SyndromeZIAAI001078 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI JAIN, ASHISH · 2009 to 2011
$1.2M
Identification of Clinically Important Microbes by Genomic and Proteomic MethodsZIACL080012 · CLC · CLINICAL CENTER · PI ZELAZNY, ADRIAN MARCELO · 2009 to 2025
$0k
Intramural NIH HHS Z01 AI000924
6 · The paper itself

Abstract

backgroundPyoderma gangrenosum-like ulcers and cellulitis of the lower extremities associated with recurrent fevers in patients with X-linked (Bruton) agammaglobulinemia have been reported to be caused by Helicobacter bilis (formerly classified as Flexispira rappini and then Helicobacter strain flexispira taxon 8). Consistent themes in these reports are the difficulty in recovering this organism in blood and wound cultures and in maintaining isolates in vitro. We confirmed the presence of this organism in a patient's culture by using a novel application of gene amplification polymerase chain reaction and electrospray ionization time-of-flight mass spectrometry. OBSERVATION: An adolescent boy with X-linked agammaglobulinemia presented with indurated plaques and a chronic leg ulcer whose origin was strongly suspected to be an H bilis organism. Histologic analysis demonstrated positive Warthin-Starry staining of curvilinear rods, which grew in culture but failed to grow when subcultured. They could not be identified by conventional techniques. A combination of gene amplification by polymerase chain reaction and electrospray ionization time-of-flight mass spectrometry confirmed the identity of this organism.

conclusionsThis novel technology was useful in the identification of a difficult-to-grow Helicobacter organism, the cause of pyoderma gangrenosum-like leg ulcers in patients with X-linked agammaglobulinemia. Correct identification of this organism as the cause of pyoderma gangrenosum-like ulcers in patients with X-linked agammaglobulinemia is of great importance for the early initiation of appropriate and curative antibiotic therapy.

Indexed as

AdolescentAgammaglobulinemiaGenetic Diseases, X-LinkedHelicobacterHelicobacter InfectionsHumansMalePolymerase Chain ReactionPyoderma GangrenosumSpectrometry, Mass, Electrospray Ionization

Identifiers

PMID20479300
PMCPMC3179848
OpenAlexW2079392379

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.