Evidence map›Paper›PMID 20478537›Full record

ArticleCell host & microbe2010

Protein kinase R contributes to immunity against specific viruses by regulating interferon mRNA integrity.

Oliver Schulz, Andreas Pichlmair, Jan Rehwinkel, Neil C Rogers, Donalyn Scheuner, Hiroki Kato, Osamu Takeuchi, Shizuo Akira, Randal J Kaufman, Caetano Reis e Sousa

Open access · bronzeAbstract read
In one paragraph

Article in Cell host & microbe, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 111 papers.

0numbers the graph read from it
0cells of the map it votes in
111citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

111 citing papers in PubMed, 161 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Review
  8. RNA recognition by PKR during DNA virus infection.Journal of medical virology · 2024
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Comprehensive literature review of monkeypox.Emerging microbes & infections · 2022
    Review
  14. Review
  15. Review
  16. Cellular origins of dsRNA, their recognition and consequences.Nature reviews. Molecular cell biology · 2022
    Review
  17. Review
  18. Review
  19. Review
  20. Article

51 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Oliver SchulzImmunobiology Laboratory, Cancer Research UK, London Research Institute, London WC2A 3PX, UK.
Andreas Pichlmair
Jan Rehwinkel
Neil C Rogers
Donalyn Scheuner
Hiroki Kato
Osamu Takeuchi
Shizuo Akira
Randal J Kaufman
Caetano Reis e Sousa
Cancer Research UK · GBOsaka University · JPHoward Hughes Medical Institute · USUniversity of Michigan–Ann Arbor · US

Funding

TRANSGENIC MODELS FOR THE STUDY OF FACTOR V FUNCTIONP01HL057346 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 1997 to 2013
$19.9M
Regulation of Factor VIII SecretionR01HL052173 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 1995 to 2014
$6.5M
Role of the Unfolded Protein Response in Beta CellR37DK042394 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 2007 to 2016
$4.9M
Regulation of ER stress-induced cell deathR01DK088227 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 2010 to 2014
$3.1M
Unfolded Protein Response in Glucose HomeostasisR01DK042394 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAUFMAN, RANDAL J. · 2003 to 2006
$1.2M
Cancer Research UKHoward Hughes Medical InstituteNHLBI NIH HHS HL052173NHLBI NIH HHS HL057346NHLBI NIH HHS P01 HL057346NHLBI NIH HHS R01 HL052173NIDDK NIH HHS DK042394NIDDK NIH HHS R01 DK042394NIDDK NIH HHS R01 DK088227NIDDK NIH HHS R37 DK042394
6 · The paper itself

Abstract

Cytosolic viral RNA recognition by the helicases RIG-I and MDA5 is considered the major pathway for IFN-alpha/beta induction in response to RNA viruses. However, other cytoplasmic RNA sensors, including the double-stranded RNA-binding protein kinase R (PKR), have been implicated in IFN-alpha/beta production, although their relative contribution and mechanism have been unclear. Using cells expressing nonfunctional PKR or reduced levels of kinase, we show that PKR is required for production of IFN-alpha/beta proteins in response to a subset of RNA viruses including encephalomyocarditis, Theiler's murine encephalomyelitis, and Semliki Forest virus, but not influenza or Sendai virus. Surprisingly, although IFN-alpha/beta mRNA induction is largely normal in PKR-deficient cells, much of that mRNA lacks the poly(A) tail, indicating that its integrity is compromised. Our results suggest that PKR plays a nonredundant role in IFN-alpha/beta production in response to some but not all viruses, in part by regulating IFN-alpha/beta mRNA stability.

Indexed as

AnimalseIF-2 KinaseEncephalomyocarditis virusInterferon-alphaInterferon-betaMiceMice, KnockoutOrthomyxoviridaeRNA, MessengerSemliki forest virusSendai virusTheiloviruseIF-2 KinaseInterferon-alphaInterferon-betaRNA, Messenger

Identifiers

PMID20478537
PMCPMC2919169
OpenAlexW2080657634

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.