Evidence map›Paper›PMID 20478025›Full record

ArticleBMC plant biology2010

The role of actin isoforms in somatic embryogenesis in Norway spruce.

Katerina Schwarzerová, Zuzana Vondráková, Lukás Fischer, Petra Boríková, Erica Bellinvia, Katerina Eliásová, Lenka Havelková, Jindriska Fiserová, Martin Vágner, Zdenek Opatrný

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Katerina SchwarzerováCharles University in Prague, Faculty of Science, Department of Plant Physiology, Vinicná 5, CZ 12844 Prague 2, Czech Republic.
Zuzana Vondráková
Lukás Fischer
Petra Boríková
Erica Bellinvia
Katerina Eliásová
Lenka Havelková
Jindriska Fiserová
Martin Vágner
Zdenek Opatrný
Charles University · CZCzech Academy of Sciences · CZCzech Academy of Sciences, Institute of Experimental Botany · CZDurham University · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSomatic embryogenesis in spruce is a process of high importance for biotechnology, yet it comprises of orchestrated series of events whose cellular and molecular details are not well understood. In this study, we examined the role of actin cytoskeleton during somatic embryogenesis in Norway spruce line AFO 541 by means of anti-actin drugs.

resultsApplication of low doses (50-100 nM) of latrunculin B (Lat B) during the maturation of somatic embryos predominantly killed suspensor cells while leaving the cells in meristematic centres alive, indicating differential sensitivity of actin in the two cell types. The treatment resulted in faster development of more advanced embryos into mature somatic embryos and elimination of insufficiently developed ones. In searching for the cause of the differential actin sensitivity of the two cell types, we analysed the composition of actin isoforms in the culture and isolated four spruce actin genes. Analysis of their expression during embryo maturation revealed that one actin isoform was expressed constitutively in both cell types, whereas three actin isoforms were expressed predominantly in suspensor cells and their expression declined during the maturation. The expression decline was greatly enhanced by Lat B treatment. Sequence analysis revealed amino-acid substitutions in the Lat B-binding site in one of the suspensor-specific actin isoforms, which may result in a different binding affinity for Lat B.

conclusionsWe show that manipulating actin in specific cell types in somatic embryos using Lat B treatment accelerated and even synchronized the development of somatic embryos and may be of practical use in biotechnology.

Indexed as

ActinsAmino Acid SubstitutionBinding SitesBridged Bicyclo Compounds, HeterocyclicCytoskeletonEmbryonic DevelopmentGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenes, PlantPhylogenyPiceaProtein IsoformsRNA, PlantSequence AlignmentThiazolidinesTissue Culture TechniquesActinsBridged Bicyclo Compounds, Heterocycliclatrunculin BProtein IsoformsRNA, PlantThiazolidines

Identifiers

PMID20478025
PMCPMC3095357
OpenAlexW2092658361

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.