Evidence map›Paper›PMID 20474083›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2010

A novel custom resequencing array for dilated cardiomyopathy.

Rebekah S Zimmerman, Stephanie Cox, Neal K Lakdawala, Allison Cirino, Debora Mancini-DiNardo, Eugene Clark, Annette Leon, Elizabeth Duffy, Emily White, Samantha Baxter and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 84 citations in OpenAlex.

  1. Review
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  7. Case Report: Family Curse: AnFrontiers in cardiovascular medicine · 2022
    Article
  8. Article
  9. New Tmc1 Deafness Mutations Impact Mechanotransduction in Auditory Hair Cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
  10. Article
  11. Article
  12. Second Hits in Dilated Cardiomyopathy.Current cardiology reports · 2020
    Review
  13. Article
  14. Exploring the Crosstalk BetweenFrontiers in genetics · 2018
    Review
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 1 country.

Rebekah S ZimmermanLaboratory for Molecular Medicine, Partners HealthCare Center for Personalized Genetic Medicine, Cambridge, Massachusetts 02139, USA.
Stephanie Cox
Neal K Lakdawala
Allison Cirino
Debora Mancini-DiNardo
Eugene Clark
Annette Leon
Elizabeth Duffy
Emily White
Samantha Baxter
Manal Alaamery
Lisa Farwell
Scott Weiss
Christine E Seidman
Jonathan G Seidman
Carolyn Y Ho
Heidi L Rehm
Birgit H Funke
Mass General Brigham · USBrigham and Women's Hospital · USHarvard University · US

Funding

Defining Pathways from Gene Mutation to Heart FailureR01HL080494 · NHLBI · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI CHEN, CHRISTOPHER S, SEIDMAN, CHRISTINE E · 2005 to 2024
$9.4M
Molecular Signaling in Hypertrophic CardiomyopathyR01HL084553 · NHLBI · HARVARD MEDICAL SCHOOL · PI SEIDMAN, JONATHAN G · 2007 to 2022
$5.9M
Evaluation of a Deafness GeneChipR21DC007183 · NIDCD · BRIGHAM AND WOMEN'S HOSPITAL · PI REHM, HEIDI L · 2005 to 2006
$471k
NHLBI NIH HHS 1R01HL084553NHLBI NIH HHS 5R01HL080494NHLBI NIH HHS R01 HL080494NHLBI NIH HHS R01 HL084553NIDCD NIH HHS R21 DC007183
6 · The paper itself

Abstract

purposeGenetic tests for the most commonly mutated genes in dilated cardiomyopathy (DCM) can confirm a clinical diagnosis in the proband and inform family management. Presymptomatic family members can be identified, allowing for targeted clinical monitoring to minimize adverse outcomes. However, the marked locus and allelic heterogeneity associated with DCM have made clinical genetic testing challenging. Novel sequencing platforms have now opened up avenues for more comprehensive diagnostic testing while simultaneously decreasing test cost and turn around time.

methodsBy using a custom design based on triplicate resequencing and separate genotyping of known disease-causing variants, we developed the DCM CardioChip for efficient analysis of 19 genes previously implicated in causing DCM.

resultsThe chip's analytical sensitivity for known and novel substitution variants is 100% and 98%, respectively. In screening 73 previously tested DCM patients who did not carry clinically significant variants in 10 genes, 7 variants of likely clinical significance were identified in the remaining 9 genes included on the chip. Compared with traditional Sanger-based sequencing, test cost and turn around time were reduced by approximately 50%.

conclusionsThe DCM CardioChip is a highly efficient screening test with a projected clinical sensitivity of 26-29%.

Indexed as

Cardiomyopathy, DilatedFamilyFemaleGenetic TestingHumansMutationPregnancy

Identifiers

PMID20474083
PMCPMC3018746
OpenAlexW2044794783

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.