Evidence map›Paper›PMID 20473554›Full record

ArticlePlant molecular biology2010

Compositional and transcriptional analyses of reduced zein kernels derived from the opaque2 mutation and RNAi suppression.

Alessandra Frizzi, Rico A Caldo, James A Morrell, Meng Wang, Linda L Lutfiyya, Wayne E Brown, Thomas M Malvar, Shihshieh Huang

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Article in Plant molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Identification of a candidate gene underlying qHKW3, a QTL for hundred-kernel weight in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  5. Article
  6. Maize kernel development.Molecular breeding : new strategies in plant improvement · 2021
    Review
  7. Article
  8. Temporal profiling of essential amino acids in developing maize kernel of normal,Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
    Article
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  10. Article
  11. Article
  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Alessandra FrizziCalgene Campus, Monsanto Company, 1920 Fifth Street, Davis, CA 95616, USA.
Rico A Caldo
James A Morrell
Meng Wang
Linda L Lutfiyya
Wayne E Brown
Thomas M Malvar
Shihshieh Huang
Monsanto (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corn protein is largely made up of a group of nutritionally limited storage proteins known as zein. The reduction of zein can be achieved by a transcriptional mutation, opaque2 (o2), or a transgene targeting zein through RNA interference (RNAi). Zein reduction results in an increase of more nutritionally balanced non-zein proteins, and therefore enhance the overall quality of corn protein. In this study, the composition of mature kernels and the transcriptional profile of developing kernels of these two types of zein reduced kernels were compared. Both zein reduced kernels contained higher levels of lysine and tryptophan and free amino acids were 10-20-folds more abundant than the wild-type counterpart. We also found that free lysine contributed partially to the increased lysine in o2 kernels while protein-bound lysine was mainly responsible for the increased lysine in transgenic zein reduction (TZR) kernels. Although they had relatively similar gene expression patterns in developing endosperm, o2 kernels had greater transcriptional changes than TZR kernels in general. A number of transcripts that were specifically down-regulated in o2 were identified. Many promoter sequences of these transcripts contain putative O2 binding motifs, suggesting that their expression is directly regulated by O2.

Indexed as

RNA InterferenceTranscription, GeneticAmino AcidsBlotting, NorthernDNA-Binding ProteinsEndospermGene Expression ProfilingGene Expression Regulation, PlantMutationOligonucleotide Array Sequence AnalysisPlant ProteinsPlants, Genetically ModifiedReproducibility of ResultsRNA, MessengerTranscription FactorsUp-RegulationAmino AcidsDNA-Binding Proteinsopaque-2 protein, Zea maysPlant ProteinsRNA, MessengerTranscription FactorsZein

Identifiers

PMID20473554
OpenAlexW2013578514

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.