Evidence map›Paper›PMID 20473315›Full record

ArticleNature structural & molecular biology2010

A'-form RNA helices are required for cytoplasmic mRNA transport in Drosophila.

Simon L Bullock, Inbal Ringel, David Ish-Horowicz, Peter J Lukavsky

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 98 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Identification of RNA structures and their roles in RNA functions.Nature reviews. Molecular cell biology · 2024
    Review
  8. Review
  9. Recent advances in RNA structurome.Science China. Life sciences · 2022
    Review
  10. International journal of molecular sciences · 2021
    Article
  11. Article
  12. Article
  13. DistinctDevelopment (Cambridge, England) · 2018
    Article
  14. Article
  15. Article
  16. Review
  17. MultipleJournal of cell science · 2017
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Simon L BullockDivision of Cell Biology, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.
Inbal Ringel
David Ish-Horowicz
Peter J Lukavsky
Cancer Research UK · GBMedical Research Council · GBMRC Laboratory of Molecular Biology · GB

Funding

Cancer Research UK A3594Medical Research Council MC_U105170649Medical Research Council MC_U105178790
6 · The paper itself

Abstract

Microtubule-based mRNA transport is widely used to restrict protein expression to specific regions in the cell and has important roles in defining cell polarity and axis determination as well as in neuronal function. However, the structural basis of recognition of cis-acting mRNA localization signals by motor complexes is poorly understood. We have used NMR spectroscopy to describe the first tertiary structure to our knowledge of an RNA element responsible for mRNA transport. The Drosophila melanogaster fs(1)K10 signal, which mediates transport by the dynein motor, forms a stem loop with two double-stranded RNA helices adopting an unusual A'-form conformation with widened major grooves reminiscent of those in B-form DNA. Structure determination of four mutant RNAs and extensive functional assays in Drosophila embryos indicate that the two spatially registered A'-form helices represent critical recognition sites for the transport machinery. Our study provides insights into the basis for RNA cargo recognition and reveals a key biological function encoded by A'-form RNA conformation.

Indexed as

Nucleic Acid ConformationAnimalsBase SequenceCytoplasmDrosophila melanogasterDrosophila ProteinsDyneinsModels, MolecularMolecular Motor ProteinsMutagenesis, Site-DirectedNuclear Magnetic Resonance, BiomolecularNuclear ProteinsRNA, MessengerRNA TransportSignal TransductionTranscription FactorsDrosophila ProteinsDyneinsfs(1)K10 protein, DrosophilaMolecular Motor ProteinsNuclear ProteinsRNA, MessengerTranscription Factors

Identifiers

PMID20473315
PMCPMC2997434
OpenAlexW2024189903

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.