Evidence map›Paper›PMID 20472555›Full record

ArticleThe Journal of biological chemistry2010

Identification of an ABCB/P-glycoprotein-specific inhibitor of auxin transport by chemical genomics.

Jun-Young Kim, Sina Henrichs, Aurélien Bailly, Vincent Vincenzetti, Valpuri Sovero, Stefano Mancuso, Stephan Pollmann, Daehwang Kim, Markus Geisler, Hong-Gil Nam

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 119 citations in OpenAlex.

  1. Article
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  9. Opposing effects ofPlant direct · 2022
    Article
  10. Article
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  13. Article
  14. Chemical Biology in Auxin Research.Cold Spring Harbor perspectives in biology · 2021
    Review
  15. Naphthylphthalamic acid associates with and inhibits PIN auxin transporters.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  16. Article
  17. A Retro-Perspective on Auxin Transport.Frontiers in plant science · 2021
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 5 countries.

Jun-Young KimLaboratory of Plant Systems Bio-Dynamics, Pohang University of Science and Technology, 790-784 Pohang, Korea.
Sina Henrichs
Aurélien Bailly
Vincent Vincenzetti
Valpuri Sovero
Stefano Mancuso
Stephan Pollmann
Daehwang Kim
Markus Geisler
Hong-Gil Nam
University of Zurich · CHInstitute of Plant Biology · HUPohang University of Science and Technology · KRKorea Research Institute of Chemical Technology · KRRuhr University Bochum · DEUniversity of Florence · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant development and physiology are widely determined by the polar transport of the signaling molecule auxin. This process is controlled on the cellular efflux level catalyzed by members of the PIN (pin-formed) and ABCB (ATP-binding cassette protein subfamily B)/P-glycoprotein family that can function independently and coordinately. In this study, we have identified by means of chemical genomics a novel auxin transport inhibitor (ATI), BUM (2-[4-(diethylamino)-2-hydroxybenzoyl]benzoic acid), that efficiently blocks auxin-regulated plant physiology and development. In many respects, BUM resembles the functionality of the diagnostic ATI, 1-N-naphtylphtalamic acid (NPA), but it has an IC(50) value that is roughly a factor 30 lower. Physiological analysis and binding assays identified ABCBs, primarily ABCB1, as key targets of BUM and NPA, whereas PIN proteins are apparently not directly affected. BUM is complementary to NPA by having distinct ABCB target spectra and impacts on basipetal polar auxin transport in the shoot and root. In comparison with the recently identified ATI, gravacin, it lacks interference with ABCB membrane trafficking. Individual modes or targets of action compared with NPA are reflected by apically shifted root influx maxima that might be the result of altered BUM binding preferences or affinities to the ABCB nucleotide binding folds. This qualifies BUM as a valuable tool for auxin research, allowing differentiation between ABCB- and PIN-mediated efflux systems. Besides its obvious application as a powerful weed herbicide, BUM is a bona fide human ABCB inhibitor with the potential to restrict multidrug resistance during chemotherapy.

Indexed as

GenomicsArabidopsisATP Binding Cassette Transporter, Subfamily B, Member 1Benzoic AcidBiological TransportDose-Response Relationship, DrugDrug Evaluation, PreclinicalGene Expression Regulation, PlantIndoleacetic AcidsModels, MolecularProtein ConformationSmall Molecule LibrariesSubstrate SpecificityATP Binding Cassette Transporter, Subfamily B, Member 1Benzoic AcidIndoleacetic AcidsSmall Molecule Libraries

Identifiers

PMID20472555
PMCPMC2906323
OpenAlexW2116985223

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.