Evidence map›Paper›PMID 20468057›Full record

ArticleAmerican journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics2010

Case-control association study of TGOLN2 in attempted suicide.

Pamela B Mahon, Adrian M Stütz, Fayaz Seifuddin, Yuqing Huo, Fernando S Goes, Dubravka Jancic, Jennifer T Judy, J Raymond Depaulo, Elliot S Gershon, Francis J McMahon and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Risk factors for suicidal ideation of the general population.Journal of Korean medical science · 2013
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Pamela B MahonDepartment of Psychiatry, Johns Hopkins School of Medicine, Baltimore, Maryland 21287, USA.
Adrian M Stütz
Fayaz Seifuddin
Yuqing Huo
Fernando S Goes
Dubravka Jancic
Jennifer T Judy
J Raymond Depaulo
Elliot S Gershon
Francis J McMahon
Peter P Zandi
James B Potash
Virginia L Willour
Johns Hopkins University · USJohns Hopkins Medicine · USEuropean Molecular Biology Laboratory · DENational Institutes of Health · USUniversity of Chicago · US

Funding

Mapping genes that contribute to bipolar disorderZIAMH002810 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MCMAHON, FRANCIS J · 2009 to 2025
$31.2M
Identification of Genes Involved in Major Mood DisordersZIAMH002843 · NIMH · NATIONAL INSTITUTE OF MENTAL HEALTH · PI MCMAHON, FRANCIS J · 2009 to 2025
$24.5M
Genetic Risk Factor Suicidal BehaviorR01MH079240 · NIMH · UNIVERSITY OF IOWA · PI WILLOUR, VIRGINIA L · 2007 to 2015
$3.5M
BIOINFORMATICS TO DISCOVER GENES IN PSYCHIATRIC ILLNESSK01MH072866 · NIMH · JOHNS HOPKINS UNIVERSITY · PI ZANDI, PETER P. · 2005 to 2009
$724k
NIMH NIH HHS K01 MH072866NIMH NIH HHS MH079240NIMH NIH HHS R01 MH079240
6 · The paper itself

Abstract

Family, twin, and adoption studies provide convincing evidence for a genetic contribution to suicidal behavior. The heritability for suicidal behavior depends in part on the transmission of psychiatric disorders, such as mood disorders and substance use disorders, but is also partly independent of them. Three linkage studies using the attempted suicide phenotype in pedigrees with bipolar disorder, major depression, or alcoholism have provided consistent evidence that 2p11-12 harbors a susceptibility gene for attempted suicide. A microarray expression study using postmortem brain samples has implicated a gene from the 2p11-12 candidate region, the trans-Golgi network protein 2 (TGOLN2) gene, as being consistently up-regulated in suicide cases as compared to controls. Here, we present a TGOLN2 case-control association study using nine single nucleotide polymorphisms (SNPs). These nine SNPs, which include seven tag SNPs and two coding SNPs, have been genotyped in 517 mood disorder subjects with a history of attempted suicide and 515 normal controls. Allelic and genotypic analyses of the case-control sample did not provide evidence for association with the attempted suicide phenotype. Eight of the nine SNPs provided supportive evidence for association (P-values ranging from 0.008 to 0.03) when we compared the attempted suicide cases with a history of alcoholism to the attempted suicide cases without a history of alcoholism. However, this association finding was not replicated in an independent sample. Taken together, these analyses do not provide support for the hypothesis that common genetic variation in TGOLN2 contributes significantly to the risk for attempted suicide in subjects with major mood disorders.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseSuicide, AttemptedAdultAlcoholismAllelesCase-Control StudiesFemaleHaplotypesHumansMaleMembrane GlycoproteinsMiddle AgedOdds RatioPolymorphism, Single NucleotideReproducibility of ResultsMembrane GlycoproteinsTGOLN2 protein, human

Identifiers

PMID20468057
PMCPMC3645851
OpenAlexW2029167631

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.