Evidence map›Paper›PMID 20467437›Full record

ArticleEMBO reports2010

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

David Llères, Marco Denegri, Marco Biggiogera, Paul Ajuh, Angus I Lamond

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 68 citations in OpenAlex.

  1. Pooled it
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  17. Long non-coding RNA NEAT1-centric gene regulation.Cellular and molecular life sciences : CMLS · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

David LlèresWellcome Trust Centre for Gene Regulation & Expression, College of Life Sciences, University of Dundee, MSI/WTB/JBC Complex, Dow Street, Dundee DD1 5EH, UK.
Marco Denegri
Marco Biggiogera
Paul Ajuh
Angus I Lamond
University of Dundee · GBUniversity of Pavia · ITWellcome Trust · GB

Funding

Wellcome Trust 073980
6 · The paper itself

Abstract

Heterogeneous nuclear ribonucleoprotein-M (hnRNP-M) is an abundant nuclear protein that binds to pre-mRNA and is a component of the spliceosome complex. A direct interaction was detected in vivo between hnRNP-M and the human spliceosome proteins cell division cycle 5-like (CDC5L) and pleiotropic regulator 1 (PLRG1) that was inhibited during the heat-shock stress response. A central region in hnRNP-M is required for interaction with CDC5L/PLRG1. hnRNP-M affects both 5' and 3' alternative splice site choices, and an hnRNP-M mutant lacking the CDC5L/PLRG1 interaction domain is unable to modulate alternative splicing of an adeno-E1A mini-gene substrate.

Indexed as

RNA Splice SitesBinding SitesCell Cycle ProteinsGreen Fluorescent ProteinsHeat-Shock ResponseHeLa CellsHeterogeneous-Nuclear Ribonucleoprotein Group MHumansIntracellular Signaling Peptides and ProteinsNuclear ProteinsProtein BindingProtein Interaction MappingProtein Structure, TertiaryRecombinant Fusion ProteinsRNA-Binding ProteinsCDC5L protein, humanCell Cycle Proteinsenhanced green fluorescent proteinGreen Fluorescent ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group MIntracellular Signaling Peptides and ProteinsNuclear ProteinsPLRG1 protein, humanRecombinant Fusion ProteinsRNA-Binding ProteinsRNA Splice Sites

Identifiers

PMID20467437
PMCPMC2892320
OpenAlexW2011279016

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.