Evidence map›Paper›PMID 20466091›Full record

ReviewAmerican journal of human genetics2010

Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

David T Miller, Margaret P Adam, Swaroop Aradhya, Leslie G Biesecker, Arthur R Brothman, Nigel P Carter, Deanna M Church, John A Crolla, Evan E Eichler, Charles J Epstein and 22 more

Abstract readReviewConsensus Statement
In one paragraph

Review in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,222 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,222citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,222 citing papers in PubMed, 2 syntheses or guidelines pooled it.

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  15. Prevalence of Phelan McDermid Syndrome Estimated To Be ~1:7300 Using a Multisource Model.Autism research : official journal of the International Society for Autism Research · 2026
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1,162 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

32 authors.

David T MillerDivision of Genetics and Department of Laboratory Medicine, Children's Hospital Boston and Harvard Medical School, Boston, MA, USA. david.miller2@childrens.harvard.edu
Margaret P Adam
Swaroop Aradhya
Leslie G Biesecker
Arthur R Brothman
Nigel P Carter
Deanna M Church
John A Crolla
Evan E Eichler
Charles J Epstein
W Andrew Faucett
Lars Feuk
Jan M Friedman
Ada Hamosh
Laird Jackson
Erin B Kaminsky
Klaas Kok
Ian D Krantz
Robert M Kuhn
Charles Lee
James M Ostell
Carla Rosenberg
Stephen W Scherer
Nancy B Spinner
Dimitri J Stavropoulos
James H Tepperberg
Erik C Thorland
Joris R Vermeesch
Darrel J Waggoner
Michael S Watson
Christa Lese Martin
David H Ledbetter

Funding

Rare & Mosaic Disorders Molecular ResearchZIAHG200328 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BIESECKER, LESLIE · 2009 to 2025
$26.8M
GENE DOSAGE IMBALANCE IN NEURODEVELOPMENTAL DISORDERSR01MH074090 · NIMH · GEISINGER CLINIC · PI David H. Ledbetter, CHRISTA LESE MARTIN · 2005 to 2026
$13.5M
CNV Atlas of Human DevelopmentRC2HD064525 · NICHD · EMORY UNIVERSITY · PI LEDBETTER, DAVID H., WAPNER, RONALD · 2009 to 2010
$3.4M
Howard Hughes Medical InstituteNICHD NIH HHS RC2 HD064525NIMH NIH HHS MH074090NIMH NIH HHS R01 MH074090
6 · The paper itself

Abstract

Chromosomal microarray (CMA) is increasingly utilized for genetic testing of individuals with unexplained developmental delay/intellectual disability (DD/ID), autism spectrum disorders (ASD), or multiple congenital anomalies (MCA). Performing CMA and G-banded karyotyping on every patient substantially increases the total cost of genetic testing. The International Standard Cytogenomic Array (ISCA) Consortium held two international workshops and conducted a literature review of 33 studies, including 21,698 patients tested by CMA. We provide an evidence-based summary of clinical cytogenetic testing comparing CMA to G-banded karyotyping with respect to technical advantages and limitations, diagnostic yield for various types of chromosomal aberrations, and issues that affect test interpretation. CMA offers a much higher diagnostic yield (15%-20%) for genetic testing of individuals with unexplained DD/ID, ASD, or MCA than a G-banded karyotype ( approximately 3%, excluding Down syndrome and other recognizable chromosomal syndromes), primarily because of its higher sensitivity for submicroscopic deletions and duplications. Truly balanced rearrangements and low-level mosaicism are generally not detectable by arrays, but these are relatively infrequent causes of abnormal phenotypes in this population (<1%). Available evidence strongly supports the use of CMA in place of G-banded karyotyping as the first-tier cytogenetic diagnostic test for patients with DD/ID, ASD, or MCA. G-banded karyotype analysis should be reserved for patients with obvious chromosomal syndromes (e.g., Down syndrome), a family history of chromosomal rearrangement, or a history of multiple miscarriages.

Indexed as

ChildChromosome BandingChromosome DisordersCongenital AbnormalitiesDevelopmental DisabilitiesHumansKaryotyping

Identifiers

PMID20466091
PMCPMC2869000

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.