Evidence map›Paper›PMID 20466062›Full record

ReviewJournal of structural biology2010

Biophysical characterization of recombinant proteins: a key to higher structural genomics success.

Masoud Vedadi, Cheryl H Arrowsmith, Abdellah Allali-Hassani, Guillermo Senisterra, Gregory A Wasney

Abstract readReview
In one paragraph

Review in Journal of structural biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Glutaryl-CoA Dehydrogenase Misfolding in Glutaric Acidemia Type 1.International journal of molecular sciences · 2023
    Article
  6. Article
  7. Review
  8. In-depth interrogation of protein thermal unfolding data with MoltenProt.Protein science : a publication of the Protein Society · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Selection of Biophysical Methods for Characterisation of Membrane Proteins.International journal of molecular sciences · 2019
    Review
  13. Principles for computational design of binding antibodies.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. AAV-ID: A Rapid and Robust Assay for Batch-to-Batch Consistency Evaluation of AAV Preparations.Molecular therapy : the journal of the American Society of Gene Therapy · 2017
    Article
  15. Article
  16. Article
  17. Protein Crystallography in Vaccine Research and Development.International journal of molecular sciences · 2015
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Masoud VedadiStructural Genomics Consortium, University of Toronto, Room 839, MaRS Center, South Tower, Toronto, Ontario, Canada. mvedadi@uhnres.utoronto.ca
Cheryl H Arrowsmith
Abdellah Allali-Hassani
Guillermo Senisterra
Gregory A Wasney

Funding

CIHRWellcome Trust
6 · The paper itself

Abstract

Hundreds of genomes have been successfully sequenced to date, and the data are publicly available. At the same time, the advances in large-scale expression and purification of recombinant proteins have paved the way for structural genomics efforts. Frequently, however, little is known about newly expressed proteins calling for large-scale protein characterization to better understand their biochemical roles and to enable structure-function relationship studies. In the Structural Genomics Consortium (SGC), we have established a platform to characterize large numbers of purified proteins. This includes screening for ligands, enzyme assays, peptide arrays and peptide displacement in a 384-well format. In this review, we describe this platform in more detail and report on how our approach significantly increases the success rate for structure determination. Coupled with high-resolution X-ray crystallography and structure-guided methods, this platform can also be used toward the development of chemical probes through screening families of proteins against a variety of chemical series and focused chemical libraries.

Indexed as

Biophysical PhenomenaCrystallography, X-RayGenomicsHumansLigandsProtein BindingProtein Interaction MappingProteomicsRecombinant ProteinsStructure-Activity RelationshipLigandsRecombinant Proteins

Identifiers

PMID20466062
PMCPMC2954336

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.