Evidence map›Paper›PMID 20463168›Full record

ArticleJournal of clinical microbiology2010

Comparison of single-copy and multicopy real-time PCR targets for detection of Mycobacterium tuberculosis in paraffin-embedded tissue.

Robert F Luo, Michael D Scahill, Niaz Banaei

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Optimized Lysis-Extraction Method Combined WithFrontiers in microbiology · 2018
    Article
  9. Article
  10. Article
  11. Article
  12. Novel developments in the epidemic of human immunodeficiency virus and tuberculosis coinfection.American journal of respiratory and critical care medicine · 2011
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Robert F LuoStanford University School of Medicine, Department of Pathology, Stanford, CA 94305-5324, USA. rluo2@stanford.edu
Michael D Scahill
Niaz Banaei
Stanford Health Care · USStanford University · US

Funding

Identification/Characterization of M. tuberculosis GenesK08AI061105 · NIAID · STANFORD UNIVERSITY · PI BANAIEE, NIAZ · 2004 to 2007
$498k
NIAID NIH HHS K08 AI061105NIAID NIH HHS L30 AI061958
6 · The paper itself

Abstract

Real-time PCR can rapidly identify Mycobacterium tuberculosis in paraffin-embedded tissue in the absence of microbiological culture. In a comparison of single-copy and multicopy PCR targets in 70 tissue samples, the sensitivities were 26% and 54%, respectively, with 100% specificity. Sensitivity was 75% for newer samples and was not decreased for acid-fast bacillus (AFB) stain-negative specimens.

Indexed as

HistocytochemistryMycobacterium tuberculosisParaffin EmbeddingBone and BonesHumansLungLymph NodesPolymerase Chain ReactionRetrospective StudiesSensitivity and SpecificitySkin

Identifiers

PMID20463168
PMCPMC2897508
OpenAlexW2107370543

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.