Evidence map›Paper›PMID 20462952›Full record

ArticleMolecular biology of the cell2010

Ubr1 and Ubr2 function in a quality control pathway for degradation of unfolded cytosolic proteins.

Nadinath B Nillegoda, Maria A Theodoraki, Atin K Mandal, Katie J Mayo, Hong Yu Ren, Rasheda Sultana, Kenneth Wu, Jill Johnson, Douglas M Cyr, Avrom J Caplan

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
6.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 138 citations in OpenAlex.

  1. A C-degron regulates Chk1 kinase by allowing stability of inactive Chk1 and by making it short- lived upon activation.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  13. Quality control of cytoplasmic proteins inside the nucleus.Computational and structural biotechnology journal · 2022
    Review
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  15. Article
  16. Article
  17. Review
  18. Article
  19. Signaling Pathways Regulated by UBR Box-Containing E3 Ligases.International journal of molecular sciences · 2021
    Review
  20. Review

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Nadinath B NillegodaDepartment of Pharmacology and Systems Therapeutics, Mount Sinai School of Medicine, New York, NY 10029, USA.
Maria A Theodoraki
Atin K Mandal
Katie J Mayo
Hong Yu Ren
Rasheda Sultana
Kenneth Wu
Jill Johnson
Douglas M Cyr
Avrom J Caplan
City College of New York · USUniversity of North Carolina at Chapel Hill · USIcahn School of Medicine at Mount Sinai · USUniversity of Idaho · US

Funding

Training and Career Development CoreU54CA132378 · NCI · CITY COLLEGE OF NEW YORK · PI Tim Alan Ahles, ADRIANA ESPINOSA · 2008 to 2026
$28.9M
TNC FUNCTION IN APOPTOTIC ANTIGEN DRIVEN AUTOIMMUNITYG12RR003060 · NCRR · CITY COLLEGE OF NEW YORK · PI GUYDEN, JERRY · 1985 to 2011
$26.1M
Roles for Hsp70 and Hsp40 in Membrane Protein TriageR01GM056981 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CYR, DOUGLAS M · 1998 to 2019
$6.1M
Hsp40 and Stress ProtectionR01GM067785 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI CYR, DOUGLAS M · 2003 to 2011
$2.2M
Hsp90 Chaperone Machine Structure and FunctionR01GM070596 · NIGMS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CAPLAN, AVROM J. · 2005 to 2009
$1.2M
NCI NIH HHS U54 CA132378NCI NIH HHS U54CA132378NCRR NIH HHS 5G12-RR03060NCRR NIH HHS G12 RR003060NIGMS NIH HHS R01 GM056981NIGMS NIH HHS R01 GM067785NIGMS NIH HHS R01GM067785NIGMS NIH HHS R01 GM070596NIGMS NIH HHS R01GM70596
6 · The paper itself

Abstract

Quality control systems facilitate polypeptide folding and degradation to maintain protein homeostasis. Molecular chaperones promote folding, whereas the ubiquitin/proteasome system mediates degradation. We show here that Saccharomyces cerevisiae Ubr1 and Ubr2 ubiquitin ligases promote degradation of unfolded or misfolded cytosolic polypeptides. Ubr1 also catalyzes ubiquitinylation of denatured but not native luciferase in a purified system. This activity is based on the direct interaction of denatured luciferase with Ubr1, although Hsp70 stimulates polyubiquitinylation of the denatured substrate. We also report that loss of Ubr1 and Ubr2 function suppressed the growth arrest phenotype resulting from chaperone mutation. This correlates with increased protein kinase maturation and indicates partitioning of foldable conformers toward the proteasome. Our findings, based on the efficiency of this quality control system, suggest that the cell trades growth potential to avert the potential toxicity associated with accumulation of unfolded or misfolded proteins. Ubr1 and Ubr2 therefore represent E3 components of a novel quality control pathway for proteins synthesized on cytosolic ribosomes.

Indexed as

AnimalsCyclic AMP-Dependent Protein KinasesHSP70 Heat-Shock ProteinsLuciferases, FireflyPeptidesProteasome Endopeptidase ComplexProteasome InhibitorsProtein ConformationProtein DenaturationProtein FoldingSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinationUbiquitin-Protein LigasesUnfolded Protein ResponseCyclic AMP-Dependent Protein KinasesHSP70 Heat-Shock ProteinsLuciferases, FireflyPeptidesProteasome Endopeptidase ComplexProteasome InhibitorsSaccharomyces cerevisiae ProteinsTPK2 protein, S cerevisiaeUbiquitin-Protein LigasesUBR1 protein, S cerevisiaeUbr2 protein, S cerevisiae

Identifiers

PMID20462952
PMCPMC2893976
OpenAlexW2077181854

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.