Evidence map›Paper›PMID 20461407›Full record

ArticleParasitology research2010

Combined mitochondrial 16S and 12S rDNA sequences: an effective genetic marker for inter-species phylogenetic analysis of zoonotic trematodes.

J Li, G H Zhao, F C Zou, X H Mo, Z G Yuan, L Ai, H L Li, Y B Weng, R Q Lin, X Q Zhu

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Article in Parasitology research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

J LiCollege of Veterinary Medicine, South China Agricultural University, Tianhe District, Guangzhou, Guangdong Province, People's Republic of China.
G H Zhao
F C Zou
X H Mo
Z G Yuan
L Ai
H L Li
Y B Weng
R Q Lin
X Q Zhu
South China Agricultural University · CNYunnan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The present study studied the genetic variation among Schistosoma japonicum isolates from different endemic regions in mainland China and examined the phylogenetic relationships of zoonotic trematodes using the combined mitochondrial 16S and 12S ribosomal DNA sequences. The fragments of 16S and 12S rDNA were amplified from 22 S. japonicum isolates, and sequenced, and the relevant sequences of other nine trematode species belonging to six genera in four families were downloaded from GenBank, and their phylogenetic relationships were re-constructed by unweighted pair-group method with arithmetic averages analyses using the combined 16S and 12S rDNA sequences, with Trichinella spiralis as outgroup. The results showed that the partial sequences of mitochondrial 16S and 12S rDNA of S. japonicum were 757 and 797 bp, respectively, and they were quite conserved among the S. japonicum isolates. Phylogenetic analysis revealed that the combined 16S and 12S rDNA sequences were not able to distinguish S. japonicum isolates in mountainous areas from those in lake/marshland areas in mainland China. However, the combined sequences could distinguish different species of zoonotic trematodes. Therefore, the combined mitochondrial 16S and 12S rDNA sequences provide an effective molecular marker for the inter-species phylogenetic analysis and differential identification of zoonotic trematodes.

Indexed as

PhylogenyAnimalsChinaDNA, MitochondrialDNA, RibosomalDNA, Ribosomal SpacerFemaleGenetic MarkersGenetic VariationHumansMaleMitochondriaMolecular Sequence DataRNA, RibosomalRNA, Ribosomal, 16SSchistosoma japonicumDNA, MitochondrialDNA, RibosomalDNA, Ribosomal SpacerGenetic MarkersRNA, RibosomalRNA, ribosomal, 12SRNA, Ribosomal, 16S

Identifiers

PMID20461407
OpenAlexW2087204942

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.