Evidence map›Paper›PMID 20457876›Full record

ArticleGenetics2010

A genetic model for the female sterility barrier between Asian and African cultivated rice species.

Andrea Garavito, Romain Guyot, Jaime Lozano, Frédérick Gavory, Sylvie Samain, Olivier Panaud, Joe Tohme, Alain Ghesquière, Mathias Lorieux

Abstract read
In one paragraph

Article in Genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Characterization and fine-mapping of a new Asian rice selfish genetic locus S58 in Asian-African rice hybrids.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Lineage-specific gene acquisition or loss is involved in interspecific hybrid sterility in rice.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Article
  15. Article
  16. Fine mapping of RYMV3: a new resistance gene to Rice yellow mottle virus from Oryza glaberrima.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Andrea GaravitoPlant Genome and Development Laboratory, Institut de Recherche pour De'veloppement, 34394 Montpellier Cedex 5, France.
Romain Guyot
Jaime Lozano
Frédérick Gavory
Sylvie Samain
Olivier Panaud
Joe Tohme
Alain Ghesquière
Mathias Lorieux

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

S(1) is the most important locus acting as a reproductive barrier between Oryza sativa and O. glaberrima. It is a complex locus, with factors that may affect male and female fertility separately. Recently, the component causing the allelic elimination of pollen was fine mapped. However, the position and nature of the component causing female sterility remains unknown. To fine map the factor of the S(1) locus affecting female fertility, we developed a mapping approach based on the evaluation of the degree of female transmission ratio distortion (fTRD) of markers. Through implementing this methodology in four O. sativa x O. glaberrima crosses, the female component of the S(1) locus was mapped into a 27.8-kb (O. sativa) and 50.3-kb (O. glaberrima) region included within the interval bearing the male component of the locus. Moreover, evidence of additional factors interacting with S(1) was also found. In light of the available data, a model where incompatibilities in epistatic interactions between S(1) and the additional factors are the cause of the female sterility barrier between O. sativa and O. glaberrima was developed to explain the female sterility and the TRD mediated by S(1). According to our model, the recombination ratio and allelic combinations between these factors would determine the final allelic frequencies observed for a given cross.

Indexed as

Models, GeneticAfricaAllelesAsiaChromosome MappingChromosomes, PlantCrosses, GeneticGene FrequencyGenes, PlantGenetic LociGenetics, PopulationMolecular Sequence DataOryzaPlant InfertilitySpecies Specificity

Identifiers

PMID20457876
PMCPMC2927767

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.