Evidence map›Paper›PMID 20457754›Full record

ArticleNucleic acids research2010

Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation.

Bart R Anderson, Hiromi Muramatsu, Subba R Nallagatla, Philip C Bevilacqua, Lauren H Sansing, Drew Weissman, Katalin Karikó

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 388 papers.

0numbers the graph read from it
0cells of the map it votes in
388citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

388 citing papers in PubMed, 658 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Recoding by NNature communications · 2026
    Article
  7. Cold-adapted RNA polymerase fromProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. The impact of psuedouridine modification on human tRNA.Biochemical Society transactions · 2026
    Review
  16. Article
  17. Article
  18. Perturbation of RNA homeostasis impairs mitochondrial respiration during poxvirus infection through excess RNA accumulation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  19. Review
  20. Enhancement of Therapeutic mRNA Translation in Cellular Stress Conditions.International journal of molecular sciences · 2026
    Review

328 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Bart R AndersonDepartment of Medicine, Department of Neurosurgery, University of Pennsylvania, Philadelphia, PA, USA.
Hiromi Muramatsu
Subba R Nallagatla
Philip C Bevilacqua
Lauren H Sansing
Drew Weissman
Katalin Karikó
Pennsylvania State University · USUniversity of Pennsylvania · US

Funding

TRAINING PROGRAM IN CELL AND MOLECULAR BIOLOGYT32GM007229 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI BARTOLOMEI, MARISA S. · 1985 to 2023
$14.0M
RNA DELIVERY FOR DENDRITIC CELL HIV ANTIGEN PREVENTIONR01AI050484 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI WEISSMAN, DREW · 2002 to 2011
$3.6M
Regulation of PKR by Novel RNA MotifsR01GM058709 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BEVILACQUA, PHILIP C · 1999 to 2012
$2.8M
GENE THERAPY TRAINING--CYSTIC FIBROSIS/GENETIC DISEASEST32DK007748 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI WOLFE, JOHN H · 1997 to 2011
$2.8M
TRAINING IN COMPARITIVE MEDICAL &MOLECULAR GENETICST32RR007063 · NCRR · UNIVERSITY OF PENNSYLVANIA · PI WOLFE, JOHN H · 1996 to 2011
$1.8M
Erythropoietin-encoding mRNA for treatment of anemiaR42HL087688 · NHLBI · RNARX · PI KARIKO, KATALIN · 2007 to 2010
$897k
Oral Delivery of RNA Encoded AntigenR21DE019059 · NIDCR · UNIVERSITY OF PENNSYLVANIA · PI WEISSMAN, DREW · 2008 to 2009
$403k
NCRR NIH HHS T32RR007063NHLBI NIH HHS R42 HL087688NHLBI NIH HHS R42HL87688NIAID NIH HHS R01AI50484NIDCR NIH HHS R21DE019059NIDDK NIH HHS T32DK07748NIGMS NIH HHS R01 GM058709NIGMS NIH HHS R01GM058709NIGMS NIH HHS T32GM07229
6 · The paper itself

Abstract

Previous studies have shown that the translation level of in vitro transcribed messenger RNA (mRNA) is enhanced when its uridines are replaced with pseudouridines; however, the reason for this enhancement has not been identified. Here, we demonstrate that in vitro transcripts containing uridine activate RNA-dependent protein kinase (PKR), which then phosphorylates translation initiation factor 2-alpha (eIF-2α), and inhibits translation. In contrast, in vitro transcribed mRNAs containing pseudouridine activate PKR to a lesser degree, and translation of pseudouridine-containing mRNAs is not repressed. RNA pull-down assays demonstrate that mRNA containing uridine is bound by PKR more efficiently than mRNA with pseudouridine. Finally, the role of PKR is validated by showing that pseudouridine- and uridine-containing RNAs were translated equally in PKR knockout cells. These results indicate that the enhanced translation of mRNAs containing pseudouridine, compared to those containing uridine, is mediated by decreased activation of PKR.

Indexed as

Protein BiosynthesisAnimalsCell LineCells, CulturedeIF-2 KinaseHumansMicePseudouridineRNA, MessengereIF-2 KinasePseudouridineRNA, Messenger

Identifiers

PMID20457754
PMCPMC2943593
OpenAlexW2156788486

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.