Evidence map›Paper›PMID 20455703›Full record

ArticleOmics : a journal of integrative biology2010

Gene expression profiling of breast cancer cell lines in response to soy isoflavones using a pangenomic microarray approach.

Samir Satih, Nasséra Chalabi, Nadège Rabiau, Rémy Bosviel, Luc Fontana, Yves-Jean Bignon, Dominique J Bernard-Gallon

Open access · hybridAbstract read
In one paragraph

Article in Omics : a journal of integrative biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 43 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Genistein: is the multifarious botanical a natural anthelmintic too?Journal of parasitic diseases : official organ of the Indian Society for Parasitology · 2018
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Coexposure to phytoestrogens and bisphenol a mimics estrogenic effects in an additive manner.Toxicological sciences : an official journal of the Society of Toxicology · 2014
    Article
  14. Article
  15. The estrogenic content of rodent diets, bedding, cages, and water bottles and its effect on bisphenol A studies.Journal of the American Association for Laboratory Animal Science : JAALAS · 2013
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Samir SatihCentre Jean Perrin, Département d'Oncogénétique, Clermont-Ferrand, France.
Nasséra Chalabi
Nadège Rabiau
Rémy Bosviel
Luc Fontana
Yves-Jean Bignon
Dominique J Bernard-Gallon
Centre Jean Perrin · FRCentre Hospitalier Universitaire de Clermont-Ferrand · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although the rate of breast cancer differs between women in Asian and Western countries, molecular genetics/genomics basis of this epidemiological observation remains elusive. Moreover, the intake of phytoestrogens is associated with a lower incidence of breast cancer. Genistein and daidzein are the primary soy isoflavones with a chemical structure similar to estrogens. Conceivably, the actions of phytoestrogens on gene expression signatures might mediate their postulated effects on breast cancer pathogenesis. The present study evaluated the transcriptional responsiveness of breast cancer cells to soy phytoestrogens using a whole-genome microarray-based approach. Human breast cancer cell lines and a fibrocystic breast cell line were treated with genistein or daidzein. We identified 278 and 334 differentially expressed genes after genistein or daidzein treatment, respectively, in estrogen-positive (MCF-7) and estrogen-negative (MDA-MB-231, MCF-10a) cells. Hierarchical clustering of this finding revealed a significant modulation, respectively, of 246 or 169 genes after genistein or daidzein exposures. Importantly, the molecular pathways for the differentially expressed genes included those that relate to cell communication, biodegradation of xenobiotics, lipid metabolism, signal transduction, and cell growth/death. These molecular observations collectively contribute to a growing knowledgebase on the putative mechanism(s) of action of phytoestrogens in breast cancer pathogenesis and chemoprevention.

Indexed as

Breast NeoplasmsCell Line, TumorCells, CulturedFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticGenisteinGenome, HumanHumansIsoflavonesMicroarray AnalysisMolecular Sequence DataMultigene FamilyPhytoestrogensdaidzeinGenisteinIsoflavonesPhytoestrogens

Identifiers

PMID20455703
PMCPMC3128303
OpenAlexW2040998090

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.