Evidence map›Paper›PMID 20451170›Full record

ArticleAmerican journal of human genetics2010

A truncating mutation in SERPINB6 is associated with autosomal-recessive nonsyndromic sensorineural hearing loss.

Asli Sirmaci, Seyra Erbek, Justin Price, Mingqian Huang, Duygu Duman, F Başak Cengiz, Güney Bademci, Suna Tokgöz-Yilmaz, Burcu Hişmi, Hilal Ozdağ and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Analysis of genetic dominance in the UK Biobank.Science (New York, N.Y.) · 2023
    Article
  6. ARNSHL gene identification: past, present and future.Molecular genetics and genomics : MGG · 2022
    Review
  7. Article
  8. Identification of Hearing Loss-Associated Variants ofBioMed research international · 2021
    Article
  9. Article
  10. Review
  11. Genetic Hearing Loss and Gene Therapy.Genomics & informatics · 2018
    Article
  12. Article
  13. Global Analysis of Protein Expression of Inner Ear Hair Cells.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 8 institutions in 4 countries.

Asli SirmaciDr. John T. Macdonald Department of Human Genetics, University of Miami, Miller School of Medicine, Miami, FL 33136, USA.
Seyra Erbek
Justin Price
Mingqian Huang
Duygu Duman
F Başak Cengiz
Güney Bademci
Suna Tokgöz-Yilmaz
Burcu Hişmi
Hilal Ozdağ
Banu Oztürk
Sevsen Kulaksizoğlu
Erkan Yildirim
Haris Kokotas
Maria Grigoriadou
Michael B Petersen
Hashem Shahin
Moien Kanaan
Mary-Claire King
Zheng-Yi Chen
Susan H Blanton
Xue Z Liu
Stephan Zuchner
Nejat Akar
Mustafa Tekin
University of Miami · USAnkara University · TRBaşkent University · TRChildren's Hospital Agia Sophia · GRBethlehem University · PSMassachusetts Eye and Ear Infirmary · USSelçuk University · TRUniversity of Washington Medical Center · US

Funding

Molecular Genetics on Non Syndromic Hearing Loss (NSHL)R01DC005575 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2001 to 2024
$10.6M
Sensory disorders in COVID -19 as an early identifier and healthcare worker protectionR01DC012115 · NIDCD · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI LIU, XUE Z · 2013 to 2022
$7.2M
Hair Cell DevelopmentR01DC006908 · NIDCD · MASSACHUSETTS GENERAL HOSPITAL · PI CHEN, ZHENG-YI · 2005 to 2015
$2.7M
NIDCD NIH HHS R01 DC005575NIDCD NIH HHS R01 DC006908NIDCD NIH HHS R01 DC012115
6 · The paper itself

Abstract

More than 270 million people worldwide have hearing loss that affects normal communication. Although astonishing progress has been made in the identification of more than 50 genes for deafness during the past decade, the majority of deafness genes are yet to be identified. In this study, we mapped a previously unknown autosomal-recessive nonsyndromic sensorineural hearing loss locus (DFNB91) to chromosome 6p25 in a consanguineous Turkish family. The degree of hearing loss was moderate to severe in affected individuals. We subsequently identified a nonsense mutation (p.E245X) in SERPINB6, which is located within the linkage interval for DFNB91 and encodes for an intracellular protease inhibitor. The p.E245X mutation cosegregated in the family as a completely penetrant autosomal-recessive trait and was absent in 300 Turkish controls. The mRNA expression of SERPINB6 was reduced and production of protein was absent in the peripheral leukocytes of homozygotes, suggesting that the hearing loss is due to loss of function of SERPINB6. We also demonstrated that SERPINB6 was expressed primarily in the inner ear hair cells. We propose that SERPINB6 plays an important role in the inner ear in the protection against leakage of lysosomal content during stress and that loss of this protection results in cell death and sensorineural hearing loss.

Indexed as

Codon, NonsenseMutationConsanguinityFamilyHearing LossHearing Loss, SensorineuralHeredityHomozygoteHumansSerpinsCodon, Nonsenseserpin B6Serpins

Identifiers

PMID20451170
PMCPMC2869020
OpenAlexW2037232726

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.