Evidence map›Paper›PMID 20450881›Full record

ArticleArchives of biochemistry and biophysics2010

Purification and characterization of Put1p from Saccharomyces cerevisiae.

Srimevan Wanduragala, Nikhilesh Sanyal, Xinwen Liang, Donald F Becker

Abstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Please, carefully, pass the P5C.Journal of experimental botany · 2024
    Article
  3. Article
  4. Article
  5. Review
  6. Structural Biology of Proline Catabolic Enzymes.Antioxidants & redox signaling · 2019
    Review
  7. Role of Proline in Pathogen and Host Interactions.Antioxidants & redox signaling · 2019
    Review
  8. Article
  9. Article
  10. Structure, function, and mechanism of proline utilization A (PutA).Archives of biochemistry and biophysics · 2017
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Proline mechanisms of stress survival.Antioxidants & redox signaling · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Srimevan WanduragalaDepartment of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, USA.
Nikhilesh Sanyal
Xinwen Liang
Donald F Becker
University of Nebraska–Lincoln · US

Funding

THE REDOX-MEDIATED REGULATION OF IRON-RESPONSIVE GENE EXPRESSION IN LIVERP20RR017675 · NCRR · UNIVERSITY OF NEBRASKA LINCOLN · PI GRASS, GREGOR · 2002 to 2011
$20.4M
Spectroelectrochemistry of the Novel PutA FlavoproteinR01GM061068 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI BECKER, DONALD F · 2001 to 2015
$3.7M
NCRR NIH HHS P20 RR-017675NCRR NIH HHS P20 RR017675NIGMS NIH HHS GM061068NIGMS NIH HHS R01 GM061068
6 · The paper itself

Abstract

In Saccharomyces cerevisiae, the PUT1 and PUT2 genes are required for the conversion of proline to glutamate. The PUT1 gene encodes Put1p, a proline dehydrogenase (PRODH) enzyme localized in the mitochondrion. Put1p was expressed and purified from Escherichia coli and shown to have a UV-visible absorption spectrum that is typical of a bound flavin cofactor. A K(m) value of 36 mM proline and a k(cat)=27 s(-1) were determined for Put1p using an artificial electron acceptor. Put1p also exhibited high activity using ubiquinone-1 (CoQ(1)) as an electron acceptor with a k(cat)=9.6 s(-1) and a K(m) of 33 microM for CoQ(1). In addition, knockout strains of the electron transfer flavoprotein (ETF) homolog in S. cerevisiae were able to grow on proline as the sole nitrogen source demonstrating that ETF is not required for proline utilization in yeast.

Indexed as

Escherichia coliProlineProline OxidaseRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquinoneProlineProline OxidaseRecombinant ProteinsSaccharomyces cerevisiae ProteinsUbiquinoneUbiquinone Q1

Identifiers

PMID20450881
PMCPMC2880193
OpenAlexW1989447705

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.