Evidence map›Paper›PMID 20448025›Full record

ArticleNucleic acids research2010

The mechanism and control of DNA transfer by the conjugative relaxase of resistance plasmid pCU1.

Rebekah Potts Nash, Sohrab Habibi, Yuan Cheng, Scott A Lujan, Matthew R Redinbo

Abstract read
In one paragraph

Article in Nucleic acids research, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistance.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  7. Orthogonal Protein Assembly on DNA Nanostructures Using Relaxases.Angewandte Chemie (International ed. in English) · 2016
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Molecular basis of antibiotic multiresistance transfer in Staphylococcus aureus.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Rebekah Potts NashDepartment of Chemistry, University of North Carolina, Chapel Hill, CB 3290 and Department of Biochemistry and Biophysics, University of North Carolina, Chapel Hill, CB 7260, Chapel Hill, NC 27599, USA.
Sohrab Habibi
Yuan Cheng
Scott A Lujan
Matthew R Redinbo

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008719 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DARVILLE, TONI, DESHMUKH, MOHANISH P · 1999 to 2023
$15.1M
Structure and Inhibition of the Conjugative DNA Relaxase-HelicaseR01AI078924 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI REDINBO, MATTHEW R · 2008 to 2012
$1.9M
Antiobic Resistance and Virulence Gene Transfer in Environmental PathogensF30ES016488 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI NASH, REBEKAH POTTS · 2008 to 2012
$144k
NIAID NIH HHS AI078924NIAID NIH HHS R01 AI078924NIEHS NIH HHS ES016488NIEHS NIH HHS F30 ES016488NIGMS NIH HHS GM008719NIGMS NIH HHS T32 GM008719
6 · The paper itself

Abstract

Bacteria expand their genetic diversity, spread antibiotic resistance genes, and obtain virulence factors through the highly coordinated process of conjugative plasmid transfer (CPT). A plasmid-encoded relaxase enzyme initiates and terminates CPT by nicking and religating the transferred plasmid in a sequence-specific manner. We solved the 2.3 A crystal structure of the relaxase responsible for the spread of the resistance plasmid pCU1 and determined its DNA binding and nicking capabilities. The overall fold of the pCU1 relaxase is similar to that of the F plasmid and plasmid R388 relaxases. However, in the pCU1 structure, the conserved tyrosine residues (Y18,19,26,27) that are required for DNA nicking and religation were displaced up to 14 A out of the relaxase active site, revealing a high degree of mobility in this region of the enzyme. In spite of this flexibility, the tyrosines still cleaved the nic site of the plasmid's origin of transfer, and did so in a sequence-specific, metal-dependent manner. Unexpectedly, the pCU1 relaxase lacked the sequence-specific DNA binding previously reported for the homologous F and R388 relaxase enzymes, despite its high sequence and structural similarity with both proteins. In summary, our work outlines novel structural and functional aspects of the relaxase-mediated conjugative transfer of plasmid pCU1.

Indexed as

Amino Acid SequenceBacterial ProteinsBase SequenceConjugation, GeneticCrystallography, X-RayDNADNA NucleotidyltransferasesMetalsModels, MolecularMolecular Sequence DataPlasmidsProtein Structure, TertiarySequence Homology, Amino AcidTyrosineBacterial ProteinsDNADNA NucleotidyltransferasesDNA relaxaseMetalsTyrosine

Identifiers

PMID20448025
PMCPMC2943615

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.