Evidence map›Paper›PMID 20446104›Full record

ArticleGenetica2010

A recombination survey using microsatellites: the O chromosome of Drosophila subobscura.

Cinta Pegueroles, Pedro A Araúz, Marta Pascual, Francesc Mestres

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. The Cyclically SeasonalFrontiers in genetics · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Cinta PeguerolesDepartament de Genètica, Facultat de Biologia, Universitat de Barcelona, Avd. Diagonal 645, 08028, Barcelona, Spain. cpegueroles@ub.edu
Pedro A Araúz
Marta Pascual
Francesc Mestres

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recombination plays an important role in species adaptation since it acts as an evolutionary force that can influence genome pattern organization. However, recombination can be detrimental in some situations, causing the breakdown of some adaptive gene combinations such as coadapted gene complexes. Genetic and cytological chromosome maps allow recombination throughout the genome to be analyzed. In this study we compare the recombination rate of two types of homokaryotypic lines of D. subobscura (O(ST) and O( 3+4 )) using a set of at least 13 microsatellite loci. The genetic maps obtained present similar lengths: 184 and 196 cM for O(ST) and O( 3+4 ) chromosomes, respectively. For most pairs of markers analyzed, a sample size of about 150 individuals appeared sufficient to obtain appropriate recombination values, with the exception of markers located in the same cytological band. Recombination rates seemed to be fairly uniform along the O chromosome, but some regional differences were observed. Several recombination hot and coldspots were detected, and their numbers were different in the homokaryotypic line types (O(ST) and O( 3+4 )). This variability could be attributed to differences between the genetic content of the two arrangements or to differences between the lines.

Indexed as

AnimalsChi-Square DistributionChromosome MappingChromosomes, InsectDrosophilaLod ScoreMicrosatellite RepeatsRecombination, Genetic

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.