Evidence map›Paper›PMID 20444686›Full record

ArticleThe Journal of biological chemistry2010

Interconversion of the specificities of human lysosomal enzymes associated with Fabry and Schindler diseases.

Ivan B Tomasic, Matthew C Metcalf, Abigail I Guce, Nathaniel E Clark, Scott C Garman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 31 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Synthetic Strategies for FRET-Enabled Carbohydrate Active Enzyme Probes.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  4. Review
  5. MultipleBBA clinical · 2017
    Article
  6. Lysosomal storage diseases.Translational science of rare diseases · 2017
    Review
  7. Human Alpha Galactosidases Transiently Produced inFrontiers in plant science · 2017
    Article
  8. Article
  9. Article
  10. Pharmacological chaperones for human α-N-acetylgalactosaminidase.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  11. Fabry disease.Orphanet journal of rare diseases · 2010
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ivan B TomasicDepartments of Biochemistry & Molecular Biology, University of Massachusetts, Amherst, Massachusetts 01003, USA.
Matthew C Metcalf
Abigail I Guce
Nathaniel E Clark
Scott C Garman
University of Massachusetts Amherst · US

Funding

Structural Studies of Lysosomal Storage DiseasesR01DK076877 · NIDDK · UNIVERSITY OF MASSACHUSETTS AMHERST · PI GARMAN, SCOTT C. · 2007 to 2021
$4.3M
NIDDK NIH HHS R01 DK076877NIDDK NIH HHS R01 DK76877
6 · The paper itself

Abstract

The human lysosomal enzymes alpha-galactosidase (alpha-GAL, EC 3.2.1.22) and alpha-N-acetylgalactosaminidase (alpha-NAGAL, EC 3.2.1.49) share 46% amino acid sequence identity and have similar folds. The active sites of the two enzymes share 11 of 13 amino acids, differing only where they interact with the 2-position of the substrates. Using a rational protein engineering approach, we interconverted the enzymatic specificity of alpha- GAL and alpha-NAGAL. The engineered alpha-GAL (which we call alpha-GAL(SA)) retains the antigenicity of alpha-GAL but has acquired the enzymatic specificity of alpha-NAGAL. Conversely, the engineered alpha-NAGAL (which we call alpha-NAGAL(EL)) retains the antigenicity of alpha-NAGAL but has acquired the enzymatic specificity of the alpha-GAL enzyme. Comparison of the crystal structures of the designed enzyme alpha-GAL(SA) to the wild-type enzymes shows that active sites of alpha-GAL(SA) and alpha-NAGAL superimpose well, indicating success of the rational design. The designed enzymes might be useful as non-immunogenic alternatives in enzyme replacement therapy for treatment of lysosomal storage disorders such as Fabry disease.

Indexed as

alpha-Galactosidasealpha-N-AcetylgalactosaminidaseAmino Acid SequenceCarbohydrate MetabolismCarbohydratesCrystallography, X-RayFabry DiseaseGlycoproteinsHumansKineticsLysosomal Storage DiseasesLysosomesMolecular Sequence DataProtein FoldingSequence Homology, Amino AcidSubstrate Specificityalpha-Galactosidasealpha-N-AcetylgalactosaminidaseCarbohydratesGlycoproteins

Identifiers

PMID20444686
PMCPMC2898384
OpenAlexW2008078187

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.