Evidence map›Paper›PMID 20443112›Full record

ArticleJournal of molecular evolution2010

Modular evolution of PGC-1alpha in vertebrates.

Christophe M R LeMoine, Stephen C Lougheed, Christopher D Moyes

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 50 citations in OpenAlex.

  1. Sirtuins may mediate temperature-induced metabolic remodeling in threespine stickleback.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2025
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  7. Review
  8. Characterization of the hypoxia-inducible factor-1 pathway in hearts of Antarctic notothenioid fishes.Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology · 2020
    Article
  9. Article
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  12. The 12-day thermoregulatory metamorphosis of Red-winged Blackbirds (Agelaius phoeniceus).Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Article
  13. Exercise quantity-dependent muscle hypertrophy in adult zebrafish (Danio rerio).Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2016
    Article
  14. Review
  15. Exhausting exercise and tissue-specific expression of monocarboxylate transporters in rainbow trout.American journal of physiology. Regulatory, integrative and comparative physiology · 2013
    Article
  16. The metabolic regulator PGC-1α directly controls the expression of the hypothalamic neuropeptide oxytocin.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Christophe M R LeMoineDepartment of Biology, Queen's University, Kingston, Ontario, Canada. clemoin@mcmaster.ca
Stephen C Lougheed
Christopher D Moyes
Queen's University · CAMcMaster University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammals, the peroxisome proliferator activated receptor (PPAR)gamma coactivator-1alpha (PGC-1alpha) is a central regulator of mitochondrial gene expression, acting in concert with nuclear respiratory factor-1 (NRF-1) and the PPARs. Its role as a "master regulator" of oxidative capacity is clear in mammals, but its role in other vertebrates is ambiguous. In lower vertebrates, although PGC-1alpha seems to play a role in coordinating the PPARalpha axis as in mammals, it does not appear to be involved in NRF-1 regulation of mitochondrial content. To evaluate the evolutionary patterns of this coactivator in fish and mammals, we investigated the evolutionary trajectories of PGC-1alpha homologs in representative vertebrate lineages. A phylogeny of the PGC-1 paralogs suggested that the family diversified through repeated genome duplication events early in vertebrate evolution. Bayesian and maximum likelihood phylogenetic reconstructions of PGC-1alpha in representative vertebrate species revealed divergent evolutionary dynamics across the different functional domains of the protein. Specifically, PGC-1alpha exhibited strong conservation of the activation/PPAR interaction domain across vertebrates, whereas the NRF-1 and MEF2c interaction domains experienced accelerated rates of evolution in actinopterygian (fish lineages) compared to sarcopterygians (tetrapod lineages). Furthermore, analysis of the amino acid sequence of these variable domains revealed successive serine- and glutamine-rich insertions within the teleost lineages, with important ramifications for PGC-1alpha function in these lineages. Collectively, these results suggest modular evolution of the PGC-1alpha protein in vertebrates that could allow for lineage-specific divergences in the coactivating capabilities of this regulator.

Indexed as

Evolution, MolecularAmino Acid SubstitutionAnimalsDatabases, ProteinHeat-Shock ProteinsHumansNuclear Respiratory Factor 1Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPeroxisome Proliferator-Activated ReceptorsPhylogenyPoint MutationProtein Processing, Post-TranslationalSequence Homology, Amino AcidTranscription FactorsVertebratesHeat-Shock ProteinsNuclear Respiratory Factor 1Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPeroxisome Proliferator-Activated ReceptorsPPARGC1A protein, humanTranscription Factors

Identifiers

PMID20443112
OpenAlexW1980542694

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.