Evidence map›Paper›PMID 20439459›Full record

ArticleThe Journal of biological chemistry2010

LC3-dependent intracellular membrane tubules induced by gamma-protocadherins A3 and B2: a role for intraluminal interactions.

Hugo H Hanson, Semie Kang, Mónica Fernández-Monreal, Twethida Oung, Murat Yildirim, Rebecca Lee, Kimita Suyama, Rachel B Hazan, Greg R Phillips

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 3 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 3 syntheses or guidelines pooled it, 41 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Guideline
  4. Article
  5. Article
  6. Surface delivery quantification reveals distinct trafficking efficiencies among clustered protocadherin isoforms.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Visualization ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Vault RNAs: hidden gems in RNA and protein regulation.Cellular and molecular life sciences : CMLS · 2021
    Review
  13. Review
  14. Review
  15. Protocadherins at the Crossroad of Signaling Pathways.Frontiers in molecular neuroscience · 2020
    Review
  16. Article
  17. Sensing Membrane Curvature in Macroautophagy.Journal of molecular biology · 2017
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hugo H HansonDepartment of Neuroscience, Mount Sinai School of Medicine, New York, NY 10029, USA.
Semie Kang
Mónica Fernández-Monreal
Twethida Oung
Murat Yildirim
Rebecca Lee
Kimita Suyama
Rachel B Hazan
Greg R Phillips
Icahn School of Medicine at Mount Sinai · USAlbert Einstein College of Medicine · US

Funding

Recognition coding at CNS synapsesR01NS051238 · NINDS · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PHILLIPS, GREG R · 2006 to 2010
$1.7M
NINDS NIH HHS NS051238NINDS NIH HHS R01 NS051238
6 · The paper itself

Abstract

Clustered protocadherins (Pcdhs) are a family of cadherin-like molecules arranged in gene clusters (alpha, beta, and gamma). gamma-Protocadherins (Pcdh-gammas) are involved in cell-cell interactions, but their prominent intracellular distribution in vivo and different knock-out phenotypes suggest that these molecules participate in still unidentified processes. We found using correlative light and electron microscopy that Pcdh-gammaA3 and -gammaB2, but not -gammaC4, -alpha1, or N-cadherin, generate intracellular juxtanuclear membrane tubules when expressed in cells. These tubules recruit the autophagy marker MAP1A/1B LC3 (LC3) but are not associated with autophagic vesicles. Lipidation of LC3 is required for its coclustering with Pcdh-gamma tubules, suggesting the involvement of an autophagic-like molecular cascade. Expression of wild-type LC3 with Pcdh-gammaA3 increased tubule length whereas expression of lipidation-defective LC3 decreased tubule length relative to Pcdh-gammaA3 expressed alone. The tubules were found to emanate from lysosomes. Deletion of the luminal/extracellular domain of Pcdh-gammaA3 preserved lysosomal targeting but eliminated tubule formation whereas cytoplasmic deletion eliminated both lysosomal targeting and tubule formation. Deletion of the membrane-proximal three cadherin repeats resulted in tubes that were narrower than those produced by full-length molecules. These results suggest that Pcdh-gammaA and -gammaB families can influence the shape of intracellular membranes by mediating intraluminal interactions within organelles.

Indexed as

AnimalsCadherin Related ProteinsCadherinsCell CommunicationCell LineGreen Fluorescent ProteinsHumansKidneyLuminescent ProteinsMiceMicroscopy, ConfocalMicroscopy, ElectronMicrotubule-Associated ProteinsMicrotubulesPlasmidsRatsCadherin Related ProteinsCadherinsGamma-protocadherinsGreen Fluorescent ProteinsLuminescent ProteinsMAP1LC3A protein, humanMicrotubule-Associated ProteinsPCDH-GAMMA-A3, humanRecombinant Fusion Proteins

Identifiers

PMID20439459
PMCPMC2898317
OpenAlexW1999639022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.