Evidence map›Paper›PMID 20437150›Full record

ArticleJournal of microbiology (Seoul, Korea)2010

Sequence analysis of the gene encoding H antigen in Escherichia coli isolated from food in Morocco.

Samira Badri, Aziz Fassouane, Ingrid Filliol, Mohammed Hassar, Nozha Cohen

Abstract readEvaluation Study
PubMed Publisher
In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Molecular Serotyping and Antibiotic Resistance Patterns ofInternational journal of microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Samira BadriLaboratoire de Microbiologie et d'Hygiène des Aliments et de l'Environnement, Institut Pasteur du Maroc, Casablanca, 20100, Morocco. samira_bdm@yahoo.fr
Aziz Fassouane
Ingrid Filliol
Mohammed Hassar
Nozha Cohen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to develop other molecular method useful for typing of motile and non motile Escherichia coli strains, a total of 207 strains of E. coli (133 reference strains, 74 food strains) were characterized by analysis of sequences of their amplified flagellin-encoding (fliC) gene products. The collection of reference strains was used for database building of fliC gene sequences. Application of this identification system to 74 E. coli food isolates revealed a reproducible and clear cut classification with very good correlation to results obtained by HhaI restriction of the amplified flagellin gene. The proposed determination of fliC sequences variations should be helpful for epidemiological studies.

Indexed as

Food MicrobiologyPolymorphism, Restriction Fragment LengthAntigens, BacterialBacterial Typing TechniquesCluster AnalysisDeoxyribonucleases, Type II Site-SpecificDNA, BacterialDNA FingerprintingEscherichia coliEscherichia coli ProteinsFlagellinGenotypeMolecular Sequence DataMoroccoPolymerase Chain ReactionSequence AnalysisAntigens, BacterialDeoxyribonucleases, Type II Site-SpecificDNA, BacterialEscherichia coli ProteinsFlagellinFliC protein, E coliGCGC-specific type II deoxyribonucleasesH antigen

Identifiers

PMID20437150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.