Evidence map›Paper›PMID 20435138›Full record

ArticleBiochimica et biophysica acta

Analysis of the functional consequences of lethal mutations in mitochondrial translational elongation factors.

Kenta Akama, Brooke E Christian, Christie N Jones, Takuya Ueda, Nono Takeuchi, Linda L Spremulli

Abstract readComparative Study
In one paragraph

Article in Biochimica et biophysica acta. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Kenta AkamaDepartment of Medical Genome Sciences, Graduate school of Frontier Sciences, University of Tokyo, Bunkyo, Tokyo113-8656, Japan.
Brooke E Christian
Christie N Jones
Takuya Ueda
Nono Takeuchi
Linda L Spremulli
The University of Tokyo · JPUniversity of North Carolina at Chapel Hill · US

Funding

MECHANISM OF PROTEIN SYNTHESIS IN MAMMALIAN MITOCHONDRIAR01GM032734 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SPREMULLI, LINDA L · 1985 to 2009
$2.8M
NIGMS NIH HHS GM32734NIGMS NIH HHS R01 GM032734
6 · The paper itself

Abstract

Mammalian mitochondria synthesize a set of thirteen proteins that are essential for energy generation via oxidative phosphorylation. The genes for all of the factors required for synthesis of the mitochondrially encoded proteins are located in the nuclear genome. A number of disease-causing mutations have been identified in these genes. In this manuscript, we have elucidated the mechanisms of translational failure for two disease states characterized by lethal mutations in mitochondrial elongation factor Ts (EF-Ts(mt)) and elongation factor Tu (EF-Tu(mt)). EF-Tu(mt) delivers the aminoacyl-tRNA (aa-tRNA) to the ribosome during the elongation phase of protein synthesis. EF-Ts(mt) regenerates EF-Tu(mt):GTP from EF-Tu(mt):GDP. A mutation of EF-Ts(mt) (R325W) leads to a two-fold reduction in its ability to stimulate the activity of EF-Tu(mt) in poly(U)-directed polypeptide chain elongation. This loss of activity is caused by a significant reduction in the ability of EF-Ts(mt) R325W to bind EF-Tu(mt), leading to a defect in nucleotide exchange. A mutation of Arg336 to Gln in EF-Tu(mt) causes infantile encephalopathy caused by defects in mitochondrial translation. EF-Tu(mt) R336Q is as active as the wild-type protein in polymerization using Escherichia coli 70S ribosomes and E. coli [(14)C]Phe-tRNA but is inactive in polymerization with mitochondrial [(14)C]Phe-tRNA and mitochondrial 55S ribosomes. The R336Q mutation causes a two-fold decrease in ternary complex formation with E. coli aa-tRNA but completely inactivates EF-Tu(mt) for binding to mitochondrial aa-tRNA. Clearly the R336Q mutation in EF-Tu(mt) has a far more drastic effect on its interaction with mitochondrial aa-tRNAs than bacterial aa-tRNAs.

Indexed as

Genes, LethalMutationAmino Acid SubstitutionAnimalsCattleEscherichia coli ProteinsMitochondriaModels, MolecularMutant ProteinsPeptide Elongation FactorsPeptide Elongation Factor TuProtein BindingProtein BiosynthesisProtein MultimerizationRNA, Transfer, Amino Acid-SpecificStructure-Activity Relationshipelongation factor TsEscherichia coli ProteinsMutant ProteinsPeptide Elongation FactorsPeptide Elongation Factor TuRNA, Transfer, Amino Acid-Specific

Identifiers

PMID20435138
PMCPMC2893280
OpenAlexW2130629666

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.