Evidence map›Paper›PMID 20431089›Full record

ArticlePlant physiology2010

Novel hydroxycinnamoyl-coenzyme A quinate transferase genes from artichoke are involved in the synthesis of chlorogenic acid.

Gabriella Sonnante, Rosalinda D'Amore, Emanuela Blanco, Ciro L Pierri, Monica De Palma, Jie Luo, Marina Tucci, Cathie Martin

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 151 citations in OpenAlex.

  1. Genome-Wide Datasets of Chicories (International journal of molecular sciences · 2023
    Pooled it
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  10. Identification ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  11. Exploring the metabolic and physiological roles ofFrontiers in plant science · 2023
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  17. Towards a Cardoon (International journal of molecular sciences · 2021
    Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Gabriella SonnanteInstitute of Plant Genetics, National Research Council, 70126 Bari, Italy. gabriella.sonnante@igv.cnr.it
Rosalinda D'Amore
Emanuela Blanco
Ciro L Pierri
Monica De Palma
Jie Luo
Marina Tucci
Cathie Martin
John Innes Centre · GBUniversity of Bari Aldo Moro · ITNational Research Council · IT

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Artichoke (Cynara cardunculus subsp. scolymus) extracts have high antioxidant capacity, due primarily to flavonoids and phenolic acids, particularly chlorogenic acid (5-caffeoylquinic acid [CGA]), dicaffeoylquinic acids, and caffeic acid, which are abundant in flower bracts and bioavailable to humans in the diet. The synthesis of CGA can occur following different routes in plant species, and hydroxycinnamoyl-coenzyme A transferases are important enzymes in these pathways. Here, we report on the isolation and characterization of two novel genes both encoding hydroxycinnamoyl-coenzyme A quinate transferases (HQT) from artichoke. The recombinant proteins (HQT1 and HQT2) were assayed after expression in Escherichia coli, and both showed higher affinity for quinate over shikimate. Their preferences for acyl donors, caffeoyl-coenzyme A or p-coumaroyl-coenzyme A, were examined. Modeling and docking analyses were used to propose possible pockets and residues involved in determining substrate specificities in the HQT enzyme family. Quantitative real-time polymerase chain reaction analysis of gene expression indicated that HQT1 might be more directly associated with CGA content. Transient and stable expression of HQT1 in Nicotiana resulted in a higher production of CGA and cynarin (1,3-dicaffeoylquinic acid). These findings suggest that several isoforms of HQT contribute to the synthesis of CGA in artichoke according to physiological needs and possibly following various metabolic routes.

Indexed as

AcyltransferasesAmino Acid SequenceBase SequenceBinding SitesChlorogenic AcidCynara scolymusDNA, ComplementaryEnzyme AssaysEscherichia coliGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenes, PlantKineticsModels, BiologicalModels, MolecularMolecular Sequence DataAcyltransferasesChlorogenic AcidDNA, Complementaryhydroxycinnamoyl-CoA-quinate transferasePlant Proteins

Identifiers

PMID20431089
PMCPMC2899911
OpenAlexW2160443567

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.