Evidence map›Paper›PMID 20427522›Full record

ArticleJournal of virology2010

Full-length hepatitis B virus core protein packages viral and heterologous RNA with similarly high levels of cooperativity.

J Zachary Porterfield, Mary Savari Dhason, Daniel D Loeb, Michael Nassal, Stephen J Stray, Adam Zlotnick

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 156 citations in OpenAlex.

  1. Article
  2. Hepatitis B Virus Nucleocapsid Assembly.Journal of molecular biology · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. A nucleosome switch primes Hepatitis B Virus infection.bioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

J Zachary PorterfieldDepartment of Molecular and Cellular Biochemistry, Indiana University, 212 S. Hawthorne Dr., Simon Hall 220D, Bloomington, IN 47405-7003, USA.
Mary Savari Dhason
Daniel D Loeb
Michael Nassal
Stephen J Stray
Adam Zlotnick
Indiana University Bloomington · USUniversity Medical Center Freiburg · DEUniversity of Mississippi · USUniversity of Oklahoma Health Sciences Center · USUniversity of Wisconsin–Madison · US

Funding

Visualizing EBV and HCMV DNA Dynamics During InfectionP01CA022443 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI WILLIAM M. SUGDEN · 1985 to 2026
$53.1M
The Biophysics of Virus Capsid AssemblyR01AI077688 · NIAID · TRUSTEES OF INDIANA UNIVERSITY · PI ZLOTNICK, ADAM · 2009 to 2013
$1.5M
Regulation of Virus Capsid AssemblyR56AI068883 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI AIR, GILLIAN M. · 2007 to 2007
$286k
NIAID NIH HHS R01 AI077688NIAID NIH HHS R01-AI077688NIAID NIH HHS R56 AI068883NIAID NIH HHS R56-AI068883
6 · The paper itself

Abstract

A critical feature of a viral life cycle is the ability to selectively package the viral genome. In vivo, phosphorylated hepatitis B virus (HBV) core protein specifically encapsidates a complex of pregenomic RNA (pgRNA) and viral polymerase; it has been suggested that packaging is specific for the complex. Here, we test the hypothesis that core protein has intrinsic specificity for pgRNA, independent of the polymerase. For these studies, we also evaluated the effect of core protein phosphorylation on assembly and RNA binding, using phosphorylated core protein and a phosphorylation mimic in which S155, S162, and S170 were mutated to glutamic acid. We have developed an in vitro system where capsids are disassembled and assembly-active core protein dimer is purified. With this protein, we have reassembled empty capsids and RNA-filled capsids. We found that core protein dimer bound and encapsidated both the HBV pregenomic RNA and heterologous RNA with high levels of cooperativity, irrespective of phosphorylation. In direct competition assays, no specificity for pregenomic RNA was observed. This suggests that another factor, such as the viral polymerase, is required for specific packaging. These results also beg the question of what prevents HBV core protein from assembling on nonviral RNA, preserving the protein for virus production.

Indexed as

Hepatitis B virusVirus AssemblyCapsidGenome, ViralHumansPhosphorylationProtein MultimerizationRNARNA, ViralViral Core ProteinsRNARNA, ViralViral Core Proteins

Identifiers

PMID20427522
PMCPMC2898219
OpenAlexW2037065104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.