Evidence map›Paper›PMID 20424173›Full record

ArticleThe Journal of biological chemistry2010

Structure-function studies of the SLC17 transporter sialin identify crucial residues and substrate-induced conformational changes.

Pascal Courville, Matthias Quick, Richard J Reimer

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  4. Article
  5. Lack of significant ganglioside changes inBiochemistry and biophysics reports · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Mutational Analysis of the GXXXG/A Motifs in the Human NaFrontiers in molecular biosciences · 2021
    Article
  11. Inherited disorders of lysosomal membrane transporters.Biochimica et biophysica acta. Biomembranes · 2020
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Pascal CourvilleDepartment of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, California 94305, USA.
Matthias Quick
Richard J Reimer
Stanford University · USNew York Psychoanalytic Society and Institute · US

Funding

Pathophysiology of Lysosomal Free Sialic Acid Storage DisordersR01NS050417 · NINDS · STANFORD UNIVERSITY · PI REIMER, RICHARD J · 2007 to 2010
$1.4M
Molecular Mechanisms of Vesicular Glutamate TransportK02NS045634 · NINDS · STANFORD UNIVERSITY · PI REIMER, RICHARD J · 2003 to 2007
$731k
NINDS NIH HHS K02 NS045634NINDS NIH HHS NS045634NINDS NIH HHS NS050417NINDS NIH HHS R01 NS050417
6 · The paper itself

Abstract

Salla disease and infantile sialic acid storage disorder are human diseases caused by loss of function of sialin, a lysosomal transporter that mediates H(+)-coupled symport of acidic sugars N-acetylneuraminic acid and glucuronic acid out of lysosomes. Along with the closely related vesicular glutamate transporters, sialin belongs to the SLC17 transporter family. Despite their critical role in health and disease, these proteins remain poorly understood both structurally and mechanistically. Here, we use substituted cysteine accessibility screening and radiotracer flux assays to evaluate experimentally a computationally generated three-dimensional structure model of sialin. According to this model, sialin consists of 12 transmembrane helices (TMs) with an overall architecture similar to that of the distantly related glycerol 3-phosphate transporter GlpT. We show that TM4 in sialin lines a large aqueous cavity that forms a part of the substrate permeation pathway and demonstrate substrate-induced alterations in accessibility of substituted cysteine residues in TM4. In addition, we demonstrate that one mutant, F179C, has a dramatically different effect on the apparent affinity and transport rate for N-acetylneuraminic acid and glucuronic acid, suggesting that it may be directly involved in substrate recognition and/or translocation. These findings offer a basis for further defining the transport mechanism of sialin and other SLC17 family members.

Indexed as

Amino Acid SequenceAnimalsCysteineGlucuronic AcidHumansLysosomal Storage DiseasesMolecular Sequence DataMutationN-Acetylneuraminic AcidOrganic Anion TransportersProtein IsoformsProtein Structure, TertiaryRatsSequence Homology, Amino AcidStructure-Activity RelationshipSymportersCysteineGlucuronic AcidN-Acetylneuraminic AcidOrganic Anion TransportersProtein Isoformssialic acid transport proteinsSymporters

Identifiers

PMID20424173
PMCPMC2885210
OpenAlexW1976594621

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.