Evidence map›Paper›PMID 20420459›Full record

ArticleBiochemistry2010

Binding of fluorinated phenylalanine alpha-factor analogues to Ste2p: evidence for a cation-pi binding interaction between a peptide ligand and its cognate G protein-coupled receptor.

Subramanyam Tantry, Fa-Xiang Ding, Mark Dumont, Jeffrey M Becker, Fred Naider

Abstract read
In one paragraph

Article in Biochemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 28 citations in OpenAlex.

  1. a-Factor: a chemical biology tool for the study of protein prenylation.Current topics in peptide & protein research · 2017
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Biophysical characterization of G-protein coupled receptor-peptide ligand binding.Biochemistry and cell biology = Biochimie et biologie cellulaire · 2011
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Subramanyam TantryDepartment of Chemistry, College of Staten Island of the City University of New York, Staten Island, New York 10314, USA.
Fa-Xiang Ding
Mark Dumont
Jeffrey M Becker
Fred Naider
City University of New York · USCollege of Staten Island · USUniversity of Rochester · USUniversity of Tennessee at Knoxville · US

Funding

PEPTIDE/CELL INTERACTIONS IN SACCHAROMYCES CEREVISIAER01GM022087 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI BECKER, JEFFREY M., NAIDER, FRED R · 1985 to 2011
$4.9M
G PROTEIN COUPLED RECEPTOR ACTIVATION STUDIED IN YEASTR01GM059357 · NIGMS · UNIVERSITY OF ROCHESTER · PI DUMONT, MARK E. · 1999 to 2009
$2.2M
Peptide-Cell Interactions in Saccharomyces cerevisiaeR56GM022087 · NIGMS · UNIVERSITY OF TENNESSEE KNOXVILLE · PI BECKER, JEFFREY M. · 2007 to 2007
$294k
NIGMS NIH HHS GM059357NIGMS NIH HHS GM22087NIGMS NIH HHS R01 GM022087NIGMS NIH HHS R01 GM059357NIGMS NIH HHS R56 GM022087
6 · The paper itself

Abstract

Ste2p, a G protein-coupled receptor (GPCR), binds alpha-factor, WHWLQLKPGQPMY, a tridecapeptide pheromone secreted by yeast cells. Upon alpha-factor binding, Ste2p undergoes conformational changes activating a signal transduction system through its associated heterotrimeric G protein leading to the arrest of cell growth in the G1 phase to prepare cells for mating. Previous studies have indicated that Tyr at position 13 of alpha-factor interacts with Arg58 on transmembrane one (TM1) of Ste2p. This observation prompted this investigation to determine whether a cation-pi type of interaction occurred between these residues. Tyrosine at position 13 of alpha-factor was systematically substituted with analogous amino acids with varying cation-pi binding energies using solid-phase peptide synthesis, and these analogues were modified by derivatization of their Lys(7) residue with the fluorescent group 7-nitrobenz-2-oxa-1,3-diazole (NBD) to serve as a useful probe for binding determination. Saturation binding of these peptides to Ste2p was assayed using whole yeast cells and a flow cytometer. In parallel the biological activities of the peptides were determined using a growth arrest assay. The data provide evidence for the presence of a cation-pi interaction between Arg58 of Ste2p and Tyr(13) of alpha-factor.

Indexed as

Binding, CompetitiveFluorineMating FactorPeptidesPhenylalaninePheromonesReceptors, Mating FactorSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsThermodynamicsFluorineMating FactorPeptidesPhenylalaninePheromonesReceptors, Mating FactorSaccharomyces cerevisiae ProteinsSTE2 protein, S cerevisiae

Identifiers

PMID20420459
PMCPMC2900185
OpenAlexW2067831535

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.