Evidence map›Paper›PMID 20419351›Full record

ArticleJournal of structural and functional genomics2010

The Scottish Structural Proteomics Facility: targets, methods and outputs.

Muse Oke, Lester G Carter, Kenneth A Johnson, Huanting Liu, Stephen A McMahon, Xuan Yan, Melina Kerou, Nadine D Weikart, Nadia Kadi, Md Arif Sheikh and 21 more

Abstract read
In one paragraph

Article in Journal of structural and functional genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Thioesterase enzyme families: Functions, structures, and mechanisms.Protein science : a publication of the Protein Society · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Muse OkeBiomedical Sciences Research Complex, University of St Andrews, St Andrews, KY16 9ST, UK.
Lester G Carter
Kenneth A Johnson
Huanting Liu
Stephen A McMahon
Xuan Yan
Melina Kerou
Nadine D Weikart
Nadia Kadi
Md Arif Sheikh
Stefan Schmelz
Mark Dorward
Michal Zawadzki
Christopher Cozens
Helen Falconer
Helen Powers
Ian M Overton
C A Johannes van Niekerk
Xu Peng
Prakash Patel
Roger A Garrett
David Prangishvili
Catherine H Botting
Peter J Coote
David T F Dryden
Geoffrey J Barton
Ulrich Schwarz-Linek
Gregory L Challis
Garry L Taylor
Malcolm F White
James H Naismith

Funding

Biotechnology and Biological Sciences Research Council BB/D522589/1Biotechnology and Biological Sciences Research Council BBS/B/14426Biotechnology and Biological Sciences Research Council BB/S/B14450Biotechnology and Biological Sciences Research Council BBS/B/14450Medical Research Council G0500367
6 · The paper itself

Abstract

The Scottish Structural Proteomics Facility was funded to develop a laboratory scale approach to high throughput structure determination. The effort was successful in that over 40 structures were determined. These structures and the methods harnessed to obtain them are reported here. This report reflects on the value of automation but also on the continued requirement for a high degree of scientific and technical expertise. The efficiency of the process poses challenges to the current paradigm of structural analysis and publication. In the 5 year period we published ten peer-reviewed papers reporting structural data arising from the pipeline. Nevertheless, the number of structures solved exceeded our ability to analyse and publish each new finding. By reporting the experimental details and depositing the structures we hope to maximize the impact of the project by allowing others to follow up the relevant biology.

Indexed as

Computational BiologyCrystallizationHumansLaboratoriesProteinsProteomicsScotlandProteins

Identifiers

PMID20419351
PMCPMC2883930

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.