Evidence map›Paper›PMID 20419285›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2010

Genetic and environmental effects influencing fruit colour and QTL analysis in raspberry.

Susan McCallum, Mary Woodhead, Christine A Hackett, Angzzas Kassim, Alistair Paterson, Julie Graham

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
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  11. Genetic and genomic resources forHorticulture research · 2019
    Review
  12. Article
  13. Mapping and expression of genes associated with raspberry fruit ripening and softening.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
    Article
  14. Article
  15. Article
  16. Review
  17. QTL involved in the modification of cyanidin compounds in black and red raspberry fruit.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Susan McCallumGenetics Programme, SCRI, Invergowrie, Dundee, DD2 5DA, UK.
Mary Woodhead
Christine A Hackett
Angzzas Kassim
Alistair Paterson
Julie Graham
University of Strathclyde · GBBiomathematics and Statistics Scotland · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Raspberry (Rubus idaeus) fruit colour was assessed in the Latham x Glen Moy mapping population using a colour meter and visual scores over three seasons and three environments. The colour measurements were found to be significantly associated with pigment content, have high heritability, and stable QTL were identified across environments and seasons. Anthocyanin content has previously been shown to be the major contributor to fruit colour in red raspberry. Major structural genes (F3'H, FLS, DFR, IFR, OMT and GST) and transcription factors (bZIP, bHLH and MYB) influencing flavonoid biosynthesis have been identified, mapped and shown to underlie QTL for quantitative and qualitative anthocyanin composition. Favourable alleles for the selected traits were identified for the aspects of fruit colour and partitioning of individual pigments.

Indexed as

EnvironmentAnthocyaninsBiosynthetic PathwaysChromosome MappingFruitGenes, PlantGenetic MarkersGenotypeModels, GeneticPigmentationPrincipal Component AnalysisQuantitative Trait, HeritableQuantitative Trait LociRosaceaeSeasonsAnthocyaninsGenetic Markers

Identifiers

PMID20419285
OpenAlexW2024741815

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.