Evidence map›Paper›PMID 20415579›Full record

ReviewAnnual review of nutrition2010

Proline metabolism and microenvironmental stress.

James M Phang, Wei Liu, Olga Zabirnyk

Open access · greenAbstract readReview
In one paragraph

Review in Annual review of nutrition, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed, 296 citations in OpenAlex.

  1. Article
  2. Proline Dehydrogenase GeneJournal of fungi (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Principles ofbioRxiv : the preprint server for biology · 2026
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Metabolic Biomarkers for Lifespan Extension and Cellular Stress inPreventive nutrition and food science · 2025
    Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Review

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

James M PhangMetabolism and Cancer Susceptibility Section, Laboratory of Comparative Carcinogenesis, Center for Cancer Research, NCI at Frederick, Frederick, Maryland 21702, USA. phangj@mail.nih.gov
Wei Liu
Olga Zabirnyk
Center for Cancer Research · US

Funding

Metabolic Mechanisms for Programmed Cell DeathZIABC010743 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PHANG, JAMES M · 2009 to 2015
$3.1M
Regulation of Proline Oxidase for Bioenergetics during Nutrient StressZIABC010744 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PHANG, JAMES M · 2009 to 2015
$2.3M
Metabolic Mechanisms for Programmed Cell DeathZ01BC010743 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PHANG, JAMES M · 2006 to 2008
$1.4M
Extracellular Matrix and Stress Substrates: the Role of ProlidaseZIABC010746 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI PHANG, JAMES M · 2009 to 2015
$1.0M
Intramural NIH HHS Z01 BC010743Intramural NIH HHS ZIA BC010743Intramural NIH HHS ZIA BC010744PHS HHS HHSN27612080001
6 · The paper itself

Abstract

Proline, the only proteinogenic secondary amino acid, is metabolized by its own family of enzymes responding to metabolic stress and participating in metabolic signaling. Collagen in extracellular matrix, connective tissue, and bone is an abundant reservoir for proline. Matrix metalloproteinases degrading collagen are activated during stress to make proline available, and proline oxidase, the first enzyme in proline degradation, is induced by p53, peroxisome proliferator-activated receptor gamma (PPARgamma) and its ligands, and by AMP-activated protein kinase downregulating mTOR. Metabolism of proline generates electrons to produce ROS and initiates a variety of downstream effects, including blockade of the cell cycle, autophagy, and apoptosis. The electrons can also enter the electron transport chain to produce adenosine triphosphate for survival under nutrient stress. Pyrroline-5-carboxylate, the product of proline oxidation, is recycled back to proline with redox transfers or is sequentially converted to glutamate and alpha-ketoglutarate. The latter augments the prolyl hydroxylation of hypoxia-inducible factor-1alpha and its proteasomal degradation. These effects of proline oxidase, as well as its decreased levels in tumors, support its role as a tumor suppressor. The mechanism for its decrease is mediated by a specific microRNA. The metabolic signaling by proline oxidase between oxidized low-density lipoproteins and autophagy provides a functional link between obesity and increased cancer risk.

Indexed as

Gene Expression Regulation, EnzymologicAMP-Activated Protein KinasesApoptosisAutophagyCollagenHumansIntracellular Signaling Peptides and ProteinsMatrix MetalloproteinasesPPAR gammaProlineProline OxidaseProtein Serine-Threonine KinasesReactive Oxygen SpeciesSignal TransductionTOR Serine-Threonine KinasesTumor Suppressor Protein p53AMP-Activated Protein KinasesCollagenIntracellular Signaling Peptides and ProteinsMatrix MetalloproteinasesMTOR protein, humanPPAR gammaProlineProline OxidaseProtein Serine-Threonine KinasesReactive Oxygen SpeciesTOR Serine-Threonine KinasesTumor Suppressor Protein p53

Identifiers

PMID20415579
PMCPMC7365493
OpenAlexW2133872445

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.