Evidence map›Paper›PMID 20410295›Full record

ArticleThe Journal of biological chemistry2010

Epigenetic regulation of BDNF expression via the scaffolding protein RACK1.

Dao-Yao He, Jérémie Neasta, Dorit Ron

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. PHB2 promotes tumorigenesisTheranostics · 2021
    Article
  7. Growth Factors and Alcohol Use Disorder.Cold Spring Harbor perspectives in medicine · 2020
    Review
  8. Article
  9. Epigenetics: a link between addiction and social environment.Cellular and molecular life sciences : CMLS · 2017
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Dopamine D3 receptor is necessary for ethanol consumption: an approach with buspirone.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2014
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Dao-Yao HeErnest Gallo Research Center, University of California, San Francisco, Emeryville, California 94608, USA.
Jérémie Neasta
Dorit Ron
Ernest Gallo Clinic and Research Center · USUniversity of California, San Francisco · US

Funding

BDNF and Alcohol AddictionR01AA016848 · NIAAA · ERNEST GALLO CLINIC AND RESEARCH CENTER · PI RON, DORIT · 2008 to 2012
$1.8M
NIAAA NIH HHS R01 AA016848
6 · The paper itself

Abstract

Scaffolding proteins are major contributors to the spatial and temporal orchestration of signaling cascades and hence cellular functions. RACK1 is a scaffolding protein that plays an important role in the regulation of, and cross-talk between, various signaling pathways. Here we report that RACK1 is a mediator of chromatin remodeling, resulting in an exon-specific expression of the brain-derived neurotrophic factor (BDNF) gene. Specifically, we found that following the activation of the cAMP pathway, nuclear RACK1 localizes at the promoter IV region of the BDNF gene by its association with histones H3 and H4, leading to the dissociation of the transcription repressor methyl-CpG-binding protein 2 (MeCP2) from the promoter, resulting in the acetylation of histone H4. These chromatin modifications lead to the activation of the promoter and to the subsequent promoter-controlled transcription of BDNF exon IV. Our findings expand our knowledge regarding the function of scaffolding proteins such as RACK1. Furthermore, this novel mechanism for the regulation of exon-specific expression of the BDNF gene by RACK1 could have implications on the neuronal functions of the growth factor including synaptic plasticity, learning, and memory.

Indexed as

Epigenesis, GeneticGene Expression Regulation, NeoplasticAnimalsBrain-Derived Neurotrophic FactorCell Line, TumorCell NucleusCpG IslandsGTP-Binding ProteinsHistonesHumansLearningMemoryMethyl-CpG-Binding Protein 2Neoplasm ProteinsRatsRats, Sprague-DawleyBrain-Derived Neurotrophic FactorGTP-Binding ProteinsHistonesMECP2 protein, humanMecp2 protein, ratMethyl-CpG-Binding Protein 2Neoplasm ProteinsRACK1 protein, humanRACK1 protein, ratReceptors, Cell SurfaceReceptors for Activated C Kinase

Identifiers

PMID20410295
PMCPMC2885182
OpenAlexW2074767062

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.