Evidence map›Paper›PMID 20409460›Full record

ArticleBiophysical journal2010

Role of ATP-hydrolysis in the dynamics of a single actin filament.

Padinhateeri Ranjith, Kirone Mallick, Jean-François Joanny, David Lacoste

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

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  7. A stochastic model for dynamics of FtsZ filaments and the formation of Z -ring.The European physical journal. E, Soft matter · 2020
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  8. Review
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  13. Microtubule dynamic instability: a new model with coupled GTP hydrolysis and multistep catastrophe.BioEssays : news and reviews in molecular, cellular and developmental biology · 2013
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Padinhateeri RanjithPhysico-Chimie UMR 168, Institut Curie, Paris, France. ranjithp@iitb.ac.in
Kirone Mallick
Jean-François Joanny
David Lacoste
Commissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInstitut de Biologie Physico-Chimique · FRLaboratoire de Chimie Théorique · FRPhysique des Cellules et Cancers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We study the stochastic dynamics of growth and shrinkage of single actin filaments taking into account insertion, removal, and ATP hydrolysis of subunits either according to the vectorial mechanism or to the random mechanism. In a previous work, we developed a model for a single actin or microtubule filament where hydrolysis occurred according to the vectorial mechanism: the filament could grow only from one end, and was in contact with a reservoir of monomers. Here we extend this approach in two ways--by including the dynamics of both ends and by comparing two possible mechanisms of ATP hydrolysis. Our emphasis is mainly on two possible limiting models for the mechanism of hydrolysis within a single filament, namely the vectorial or the random model. We propose a set of experiments to test the nature of the precise mechanism of hydrolysis within actin filaments.

Indexed as

Actin CytoskeletonActinsAdenosine TriphosphateDiffusionHydrolysisModels, BiologicalTime FactorsActinsAdenosine Triphosphate

Identifiers

PMID20409460
PMCPMC2856186
OpenAlexW1973530331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.