Evidence map›Paper›PMID 20408520›Full record

ArticleJournal of the American Chemical Society2010

Using isotopic tools to dissect and quantitate parallel metabolic pathways.

Sushabhan Sadhukhan, Yong Han, Guo-Fang Zhang, Henri Brunengraber, Gregory P Tochtrop

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. ACAD10 and ACAD11 allow entry of 4-hydroxy fatty acids into β-oxidation.Cellular and molecular life sciences : CMLS · 2024
    Article
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  12. Metabolomics, pathway regulation, and pathway discovery.The Journal of biological chemistry · 2011
    Review
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sushabhan SadhukhanDepartment of Chemistry, Case Western Reserve University, 10900 Euclid Avenue, Cleveland, Ohio 44106, USA.
Yong Han
Guo-Fang Zhang
Henri Brunengraber
Gregory P Tochtrop

Funding

MOLECULAR BASIS OF OXIDATIVE MODIFICATION OF LDLR01HL053315 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI SALOMON, ROBERT GERD · 1996 to 2010
$3.4M
Dynamic Metabolomics via Isotopomer Analysis(RMI)R33DK070291 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI BRUNENGRABER, HENRI · 2004 to 2006
$3.3M
Metabolomic and Isotopomer Analysis of Xenobiotic StressR01ES013925 · NIEHS · CASE WESTERN RESERVE UNIVERSITY · PI BRUNENGRABER, HENRI · 2005 to 2009
$2.7M
NHLBI NIH HHS R01 HL053315NHLBI NIH HHS R01HL053315NIDDK NIH HHS R33 DK070291NIDDK NIH HHS R33DK070291NIEHS NIH HHS R01 ES013925NIEHS NIH HHS R01ES013925
6 · The paper itself

Abstract

4-Hydroxyacids are ubiquitous in human physiology. They are derived from the drugs of abuse gamma-hydroxybutyrate (GHB), gamma-hydroxypentanoate(GHP), in addition to the omnipresent lipid peroxidation product 4-hydroxy-2-(E)-nonenal (4-HNE). Previously we reported that 4-hydroxyacids are catabolized through two parallel pathways. In this report we detail two isotopic tools that have allowed the dissection of this catabolic process and illustrate how these tools can be used to quantify the relative flux down each pathway. We found that 4-hydroxynonanoate (4-hydroxyacid derived from 4-HNE) is primarly catabolized through a pathway that phosphorylates the C-4 hydroxyl and isomerizes it to a C-3 hydroxy compound, which is catabolized through beta-oxidation.

Indexed as

Metabolic Networks and PathwaysAldehydesAnimalsFatty Acids, UnsaturatedHydroxy AcidsIsotopesLiverRats4-hydroxy-2-nonenal4-hydroxynonenoic acidAldehydesFatty Acids, UnsaturatedHydroxy AcidsIsotopes

Identifiers

PMID20408520
PMCPMC3830949

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.