Evidence map›Paper›PMID 20407637›Full record

ArticleFrontiers in neural circuits2010

The Neuronal Splicing Factor Nova Co-Localizes with Target RNAs in the Dendrite.

Claudia Racca, Alejandra Gardiol, Taesun Eom, Jernej Ule, Antoine Triller, Robert B Darnell

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neural circuits, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
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  9. Article
  10. Reduced levels of ALS geneFrontiers in neuroscience · 2023
    Article
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  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Physical and Functional Interaction between 5-HTExperimental neurobiology · 2019
    Article
  19. Review
  20. The Future of Cross-Linking and Immunoprecipitation (CLIP).Cold Spring Harbor perspectives in biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Claudia RaccaBiologie Cellulaire de la Synapse Normale et Pathologique, Institut National de la Santé et de la Recherche Médicale, Ecole Normale Supérieure Paris, France.
Alejandra Gardiol
Taesun Eom
Jernej Ule
Antoine Triller
Robert B Darnell
Institut de Biologie de l'École Normale Supérieure · FR

Funding

NEUROLOGY AND THE MOLECULAR ROLE OF N-RBPS IN THE BRAINR01NS034389 · NINDS · ROCKEFELLER UNIVERSITY · PI DARNELL, ROBERT B · 1995 to 2016
$6.3M
Structure/function studies of RBPs in neurologic diseaseR01NS040955 · NINDS · ROCKEFELLER UNIVERSITY · PI DARNELL, ROBERT B · 2001 to 2005
$3.3M
Howard Hughes Medical InstituteNINDS NIH HHS R01 NS034389NINDS NIH HHS R01 NS040955Wellcome Trust 089701
6 · The paper itself

Abstract

Nova proteins are neuron-specific RNA binding proteins targeted by autoantibodies in a disorder manifest by failure of motor inhibition, and they regulate splicing and alternative 3' processing. Nova regulates splicing of RNAs encoding synaptic proteins, including the inhibitory glycine receptor alpha2 subunit (GlyRalpha2), and binds to others, including the GIRK2 channel. We found that Nova harbors functional NES and NLS elements, shuttles between the nucleus and cytoplasm, and that 50% of the protein localizes to the soma-dendritic compartment. Immunofluoresence and EM analysis of spinal cord motor neurons demonstrated that Nova co-localizes beneath synaptic contacts in dendrites with the same RNA, GlyRalpha2, whose splicing it regulates in the nucleus. HITS-CLIP identified intronic and 3' UTR sites where Nova binds to GlyRalpha2 and GIRK2 transcripts in the brain. This led directly to the identification of a 3' UTR localization element that mediates Nova-dependent localization of GIRK2 in primary neurons. These data demonstrate that HITS-CLIP can identify functional RNA localization elements, and they suggest new links between the regulation of nuclear RNA processing and mRNA localization.

Indexed as

GIRK2glycine receptorHITS-CLIPnovaRNA localizationRNA splicingshuttling proteinspinal motor neuron

Identifiers

PMID20407637
PMCPMC2856630
OpenAlexW2048518974

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.