Evidence map›Paper›PMID 20406488›Full record

ArticleBMC genomics2010

Genome response to tissue plasminogen activator in experimental ischemic stroke.

Glen C Jickling, Xinhua Zhan, Bradley P Ander, Renée J Turner, Boryana Stamova, Huichun Xu, Yingfang Tian, Dazhi Liu, Ryan R Davis, Paul A Lapchak and 1 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 31 citations in OpenAlex.

  1. Effects of gender on gene expression in the blood of ischemic stroke patients.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism · 2012
    Trial
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. The transcriptome of cerebral ischemia.Brain research bulletin · 2012
    Review
  8. Article
  9. Article
  10. Gene-drug interaction in stroke.Stroke research and treatment · 2011
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Glen C JicklingDepartment of Neurology and M,I,N,D, Institute, University of California at Davis, Sacramento, California 95817, USA. gcjickling@ucdavis.edu
Xinhua Zhan
Bradley P Ander
Renée J Turner
Boryana Stamova
Huichun Xu
Yingfang Tian
Dazhi Liu
Ryan R Davis
Paul A Lapchak
Frank R Sharp
University of California, Davis · USCedars-Sinai Medical Center · US

Funding

UC DAVIS CLINICAL AND TRANSLATIONAL SCIENCE CENTER: BPCAUL1RR024146 · NCRR · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BERGLUND, LARS F · 2006 to 2011
$27.0M
MARKERS OF CNS INJURYR01NS028167 · NINDS · UNIVERSITY OF CINCINNATI · PI SHARP, FRANK R · 1990 to 2006
$1.9M
Hemorrhage Induced Brain InjuryR01NS054652 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SHARP, FRANK R · 2007 to 2011
$1.7M
Neuronal Injury and Blood GenomicsR01NS043252 · NINDS · UNIVERSITY OF CINCINNATI · PI SHARP, FRANK R · 2002 to 2005
$1.4M
Canadian Institutes of Health ResearchNCRR NIH HHS UL1 RR024146NINDS NIH HHS NS028167NINDS NIH HHS NS043252NINDS NIH HHS NS054652
6 · The paper itself

Abstract

backgroundTissue plasminogen activator (tPA) is known to have functions beyond fibrinolysis in acute ischemic stroke, such as blood brain barrier disruption. To further delineate tPA functions in the blood, we examined the gene expression profiles induced by tPA in a rat model of ischemic stroke.

resultstPA differentially expressed 929 genes in the blood of rats (p <or= 0.05, fold change >or= |1.2|). Genes identified had functions related to modulation of immune cells. tPA gene expression was found to be dependent on the reperfusion status of cerebral vasculature. The majority of genes regulated by tPA were different from genes regulated by ischemic stroke.

conclusionstPA modulates gene expression in the blood of rats involving immune cells in a manner that is dependent on the status of vascular reperfusion. These non-fibrinolytic activities of tPA in the blood serve to better understand tPA-related complications.

Indexed as

Gene Expression ProfilingAnimalsBlood-Brain BarrierBrain IschemiaLeukocytesMaleRatsRats, Sprague-DawleyReperfusionStrokeTissue Plasminogen ActivatorTissue Plasminogen Activator

Identifiers

PMID20406488
PMCPMC2875237
OpenAlexW2007278773

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.