Evidence map›Paper›PMID 20404093›Full record

ArticleMolecular and cellular biology2010

Mammalian DEAD box protein Ddx51 acts in 3' end maturation of 28S rRNA by promoting the release of U8 snoRNA.

Leena Srivastava, Yevgeniya R Lapik, Minshi Wang, Dimitri G Pestov

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  9. Roles of ribosomal RNA in health and disease.Frontiers in RNA research · 2023
    Article
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  18. RNA Helicases as Shadow Modulators of Cell Cycle Progression.International journal of molecular sciences · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Leena SrivastavaDepartment of Cell Biology, University of Medicine and Dentistry of New Jersey, 2 Medical Center Drive, Stratford, NJ 08084, USA.
Yevgeniya R Lapik
Minshi Wang
Dimitri G Pestov
Stratford University · USUniversity of Illinois Chicago · US

Funding

Monitoring mechanisms in mammalian ribosome biogenesisR01GM074091 · NIGMS · UNIV OF MED/DENT NJ-SCH OSTEOPATHIC MED · PI PESTOV, DIMITRI G · 2005 to 2014
$2.4M
NIGMS NIH HHS GM074091NIGMS NIH HHS R01 GM074091
6 · The paper itself

Abstract

Biogenesis of eukaryotic ribosomes requires a number of RNA helicases that drive molecular rearrangements at various points of the assembly pathway. While many ribosome synthesis factors are conserved among all eukaryotes, certain features of ribosome maturation, such as U8 snoRNA-assisted processing of the 5.8S and 28S rRNA precursors, are observed only in metazoan cells. Here, we identify the mammalian DEAD box helicase family member Ddx51 as a novel ribosome synthesis factor and an interacting partner of the nucleolar GTP-binding protein Nog1. Unlike any previously studied yeast helicases, Ddx51 is required for the formation of the 3' end of 28S rRNA. Ddx51 binds to pre-60S subunit complexes and promotes displacement of U8 snoRNA from pre-rRNA, which is necessary for the removal of the 3' external transcribed spacer from 28S rRNA and productive downstream processing. These data demonstrate the emergence of a novel factor that facilitates a pre-rRNA processing event specific for higher eukaryotes.

Indexed as

RNA 3' End ProcessingAnimalsBase PairingCell LineCentrifugation, Density GradientDEAD-box RNA HelicasesGene Knockdown TechniquesGenes, DominantGTP PhosphohydrolasesMiceMutant ProteinsMutationNuclear ProteinsPhenotypeProtein BindingRibosomesDdx51 protein, mouseDEAD-box RNA HelicasesGTP PhosphohydrolasesMutant ProteinsNog1 protein, mouseNuclear ProteinsRNA PrecursorsRNA, Ribosomal, 28SRNA, Small Nucleolar

Identifiers

PMID20404093
PMCPMC2876670
OpenAlexW2120161238

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.