Evidence map›Paper›PMID 20396999›Full record

ArticleDiabetologia2010

Hepatocyte nuclear factor (HNF)-4alpha-driven epigenetic silencing of the human PED gene.

P Ungaro, R Teperino, P Mirra, M Longo, M Ciccarelli, G A Raciti, C Nigro, C Miele, P Formisano, F Beguinot

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Article in Diabetologia, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

P UngaroDipartimento di Biologia e Patologia Cellulare e Molecolare L. Califano & Istituto di Endocrinologia ed Oncologia Sperimentale del CNR, Università di Napoli Federico II, Via Sergio Pansini, 5, Naples, 80131, Italy. pungaro@ieos.cnr.it
R Teperino
P Mirra
M Longo
M Ciccarelli
G A Raciti
C Nigro
C Miele
P Formisano
F Beguinot
Institute for Experimental Endocrinology and Oncology · ITUniversity of Naples Federico II · IT

Funding

Telethon GGP04041
6 · The paper itself

Abstract

aims/hypothesisOverexpression of PED (also known as PEA15) determines insulin resistance and impaired insulin secretion and may contribute to progression toward type 2 diabetes. Recently, we found that the transcription factor hepatocyte nuclear factor (HNF)-4alpha binds to PED promoter and represses its transcription. However, the molecular details responsible for regulation of PED gene remain unclear.

methodsHere we used gain and loss of function approaches to investigate the hypothesis that HNF-4alpha controls chromatin remodelling at the PED promoter in human cell lines.

resultsHNF-4alpha production and binding induce chromatin remodelling at the -250 to 50 region of PED, indicating that remodelling is limited to two nucleosomes located at the proximal promoter. Chromatin immunoprecipitation assays also revealed concomitant HNF-4alpha-induced deacetylation of histone H3 at Lys9 and Lys14, and increased dimethylation of histone H3 at Lys9. The latter was followed by reduction of histone H3 Lys4 dimethylation. HNF-4alpha was also shown to target the histone deacetylase complex associated with silencing mediator of retinoic acid and thyroid hormone receptor, both at the PED promoter, and at GRB14 and USP21 regulatory regions, leading to a reduction of mRNA levels. Moreover, HNF-4alpha silencing and PED overexpression were accompanied by a significant reduction of hepatic glycogen content. CONCLUSIONS/

interpretationThese results show that HNF-4alpha serves as a scaffold protein for histone deacetylase activities, thereby inhibiting liver expression of genes including PED. Dysregulation of these mechanisms may lead to upregulation of the PED gene in type 2 diabetes.

Indexed as

AcetylationAnimalsApoptosis Regulatory ProteinsBlotting, WesternChromatin Assembly and DisassemblyChromatin ImmunoprecipitationEpigenesis, GeneticHepatocyte Nuclear Factor 4Hep G2 CellsHistonesHumansIntracellular Signaling Peptides and ProteinsMiceMice, TransgenicNucleosomesPhosphoproteinsApoptosis Regulatory ProteinsHepatocyte Nuclear Factor 4HistonesIntracellular Signaling Peptides and ProteinsNucleosomesPEA15 protein, humanPhosphoproteins

Identifiers

PMID20396999
OpenAlexW2105632963

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.