Evidence map›Paper›PMID 20395297›Full record

ArticleThe Journal of biological chemistry2010

The 19-amino acid insertion in the tumor-associated splice isoform Rac1b confers specific binding to p120 catenin.

Lidiya Orlichenko, Rory Geyer, Masahiro Yanagisawa, Davitte Khauv, Evette S Radisky, Panos Z Anastasiadis, Derek C Radisky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  7. Review
  8. Activated Rho GTPases in Cancer-The Beginning of a New Paradigm.International journal of molecular sciences · 2018
    Review
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  16. Matrix metalloproteinases as breast cancer drivers and therapeutic targets.Frontiers in bioscience (Landmark edition) · 2015
    Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lidiya OrlichenkoDepartment of Cancer Biology, Mayo Clinic, Jacksonville, Florida 32224, USA.
Rory Geyer
Masahiro Yanagisawa
Davitte Khauv
Evette S Radisky
Panos Z Anastasiadis
Derek C Radisky
Mayo Clinic in Florida · US

Funding

The Role of CHFR in Tumorigenesis and Paclitaxel-Sensitivity in Breast CancerP50CA116201 · NCI · MAYO CLINIC ROCHESTER · PI PETER C LUCAS · 2005 to 2026
$49.9M
Mechanisms of MMP-Induced Malignancy in Breast CellsR01CA122086 · NCI · MAYO CLINIC JACKSONVILLE · PI RADISKY, DEREK C · 2007 to 2011
$1.4M
Cadherin-p120 signaling in motility and invasivenessR01CA100467 · NCI · MAYO CLINIC JACKSONVILLE · PI ANASTASIADIS, PANAGIOTIS Z. · 2004 to 2008
$1.3M
In Vitro Synthesis of Fibrosis GenesisR21CA128660 · NCI · PRINCETON UNIVERSITY · PI NELSON, CELESTE M · 2007 to 2008
$339k
NCI NIH HHS CA100467NCI NIH HHS CA116201NCI NIH HHS CA122086NCI NIH HHS CA128660NCI NIH HHS P50 CA116201NCI NIH HHS R01 CA100467NCI NIH HHS R01 CA122086NCI NIH HHS R21 CA128660
6 · The paper itself

Abstract

The Rac1b splice isoform contains a 19-amino acid insertion not found in Rac1; this insertion leads to decreased GTPase activity and reduced affinity for GDP, resulting in the intracellular predominance of GTP-bound Rac1b. Here, using co-precipitation and proteomic methods, we find that Rac1b does not bind to many common regulators of Rho family GTPases but that it does display enhanced binding to SmgGDS, RACK1, and p120 catenin (p120(ctn)), proteins involved in cell-cell adhesion, motility, and transcriptional regulation. We use molecular modeling and structure analysis approaches to determine that the interaction between Rac1b and p120(ctn) is dependent upon protein regions that are predicted to be unstructured in the absence of molecular complex formation, suggesting that the interaction between these two proteins involves coupled folding and binding. We also find that directed cell movement initiated by Rac1b is dependent upon p120. These results define a distinct binding functionality of Rac1b and provide insight into how the distinct phenotypic program activated by this protein may be implemented through molecular recognition of effectors distinct from those of Rac1.

Indexed as

Alternative SplicingAmino AcidsAmino Acid SequenceAnimalsCateninsCell AdhesionCell MovementDelta CateninEpithelial CellsMiceMolecular Sequence DataPhenotypeProtein BindingProtein Isoformsrac1 GTP-Binding ProteinTranscription, GeneticAmino AcidsCateninsCtnnd1 protein, mouseDelta CateninProtein Isoformsrac1 GTP-Binding ProteinRAC1 protein, human

Identifiers

PMID20395297
PMCPMC2885194
OpenAlexW1975772628

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.