Evidence map›Paper›PMID 20392845›Full record

ArticleJournal of virology2010

An LYPSL late domain in the gag protein contributes to the efficient release and replication of Rous sarcoma virus.

Kari A Dilley, Devon Gregory, Marc C Johnson, Volker M Vogt

Abstract read
In one paragraph

Article in Journal of virology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 33 citations in OpenAlex.

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  17. Virus budding and the ESCRT pathway.Cell host & microbe · 2013
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kari A DilleyDepartment of Molecular Biology and Genetics, Biotech Bldg., Cornell University, Ithaca, NY 14853, USA.
Devon Gregory
Marc C Johnson
Volker M Vogt
Cornell University · USUniversity of Missouri · US

Funding

AVIAN RETROVIRUS STRUCTURE AND ASSEMBLYR01CA020081 · NCI · CORNELL UNIVERSITY ITHACA · PI VOGT, VOLKER M. · 1985 to 2011
$3.9M
Elucidation of HIV Env acquisition strategiesR01AI073098 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI JOHNSON, MARC C · 2008 to 2012
$1.5M
AVIAN RETROVIRUS STRUCTURE AND ASSEMBLYR37CA020081 · NCI · CORNELL UNIVERSITY ITHACA · PI VOGT, VOLKER M. · 1988 to 1995
–
NCI NIH HHS CA20081NCI NIH HHS R01 CA020081NIAID NIH HHS AI073098NIAID NIH HHS R01 AI073098
6 · The paper itself

Abstract

The efficient release of newly assembled retrovirus particles from the plasma membrane requires the recruitment of a network of cellular proteins (ESCRT machinery) normally involved in the biogenesis of multivesicular bodies and in cytokinesis. Retroviruses and other enveloped viruses recruit the ESCRT machinery through three classes of short amino acid consensus sequences termed late domains: PT/SAP, PPXY, and LYPX(n)L. The major late domain of Rous sarcoma virus (RSV) has been mapped to a PPPY motif in Gag that binds members of the Nedd4 family of ubiquitin ligases. RSV Gag also contains a second putative late domain motif, LYPSL, positioned 5 amino acids downstream of PPPY. LYPX(n)L motifs have been shown to support budding in other retroviruses by binding the ESCRT adaptor protein Alix. To investigate a possible role of the LYPSL motif in RSV budding, we constructed PPPY and LYPSL mutants in the context of an infectious virus and then analyzed the budding rates, spreading profiles, and budding morphology. The data imply that the LYPSL motif acts as a secondary late domain and that its role in budding is amplified in the absence of a fully functional PPPY motif. The LYPXL motif proved to be a stronger late domain when an aspartic acid was substituted for the native serine, recapitulating the properties of the LYPDL late domain of equine infectious anemia virus. The overexpression of human Alix in the absence of a fully functional PPPY late domain partially rescued both the viral budding rate and viral replication, supporting a model in which the RSV LYPSL motif mediates budding through an interaction with the ESCRT adaptor protein Alix.

Indexed as

Virus ReleaseVirus ReplicationAmino Acid SubstitutionAnimalsCalcium-Binding ProteinsCell Cycle ProteinsCell LineChickensEndosomal Sorting Complexes Required for TransportGene Products, gagHumansMutagenesis, Site-DirectedProtein BindingProtein Structure, TertiaryRous sarcoma virusCalcium-Binding ProteinsCell Cycle ProteinsEndosomal Sorting Complexes Required for TransportGene Products, gagPDCD6IP protein, human

Identifiers

PMID20392845
PMCPMC2903267
OpenAlexW2170480794

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.