Evidence map›Paper›PMID 20392038›Full record

ArticleJournal of the American Chemical Society2010

Activation and deactivation of DNAzyme and antisense function with light for the photochemical regulation of gene expression in mammalian cells.

Douglas D Young, Mark O Lively, Alexander Deiters

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 194 citations in OpenAlex.

  1. Article
  2. Light-responsive DNA nanostructures.Nature reviews. Chemistry · 2026
    Review
  3. Review
  4. Article
  5. Review
  6. Optogenetic Tools for Regulating RNA Metabolism and Functions.Chembiochem : a European journal of chemical biology · 2024
    Review
  7. Article
  8. Article
  9. Review
  10. PhotocleavableChemical reviews · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Expanding Catch and Release DNA Decoy (CRDD) Technology with Pyrimidine Mimics.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Douglas D YoungDepartment of Chemistry, North Carolina State University, Raleigh, North Carolina 27695, USA.
Mark O Lively
Alexander Deiters
North Carolina State University · US

Funding

Switchable Systems for Spatio-Temporal Control of Gene Expression in ZebrafishR01GM079114 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI DEITERS, ALEXANDER · 2007 to 2011
$1.6M
NIGMS NIH HHS R01 GM079114NIGMS NIH HHS R01GM079114
6 · The paper itself

Abstract

The photochemical regulation of biological systems represents a very precise means of achieving high-resolution control over gene expression in both a spatial and a temporal fashion. DNAzymes are enzymatically active deoxyoligonucleotides that enable the site-specific cleavage of RNA and have been used in a variety of in vitro applications. We have previously reported the photochemical activation of DNAzymes and antisense agents through the preparation of a caged DNA phosphoramidite and its site-specific incorporation into oligonucleotides. The presence of the caging group disrupts either DNA:RNA hybridization or catalytic activity until removed via a brief irradiation with UV light. Here, we are expanding this concept by investigating the photochemical deactivation of DNAzymes and antisense agents. Moreover, we report the application of light-activated and light-deactivated antisense agents to the regulation of gene function in mammalian cells. This represents the first example of gene silencing antisense agents that can be turned on and turned off in mammalian tissue culture.

Indexed as

Gene Expression RegulationLightBase SequenceCell LineDNADNA, CatalyticEnzyme ActivationGene ExpressionHumansMolecular Sequence DataNucleic Acid ConformationOligodeoxyribonucleotides, AntisensePhotochemical ProcessesRNADNADNA, CatalyticOligodeoxyribonucleotides, AntisenseRNA

Identifiers

PMID20392038
PMCPMC2862549
OpenAlexW2086783930

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.